Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1766 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGCAAGGTTTACACTGCAAAGGGTCCTCGTGATCGAAGGGTTAGGCTCTCAGCACACACTGCTATTGAGTTCTATGATGTTCAAGATCGTTTAGGCTATGACAGACCAAGCAAAGCCGTGGACTGGCTCATCAAGAAGGCCAAGAATGCTATTGATAAGCTTGGTGAGCTTCCTCCATGGCACCCTACTCCTAACACTGCTGCAGATGCTGAGAACAACAACAACAACAACAATGCAGGGTCAAGTGACATGGCCATTGCAGCAGAACAATCTGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCGGCTTTCATTCCCTCACCTATTGACACTGATGCAATAGCCTTCTTTCCAACAACCACTGCAACCTCCTCCATCAATTTCCAAACCTACCCTCCTGATATAATCTCAAGAACCAACAACTCCACTGAGGATCTTGGCCTTTCCCTTCACTCCTTCCAAGACCCTGGTTTGATTCATGGCCAGACCCAAGCAGGTGCAAACCAGACACAAACACCTTCCAATGACCAAAGCCTCTTCTCTGGCTCAACTCAAGTGGGGTTTGAGGCCAATTACCCCAGGATTGTCACTTGGAACAGTGATGCAAGCATAGATATGAACAGAACCGGGTTCATGGTCAATTCACCAGCACTTCTAGGCCAAGGTGGTTCTGCTGCATTTTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGAGATTCCAATGGCTTCATCAGAACATCACAAGTCACAGCCAATTCAACAAGCTTCAATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCGGGGTTCTGCATTCCTGCTAGAATCCAAGGAGAGGATGGAGTTGGTCCTGACAAGCCATCATCTTCTTCTCCTAATTCTCATCACTGA 1032 0.4777 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLGELPPWHPTPNTAADAENNNNNNNAGSSDMAIAAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPDIISRTNNSTEDLGLSLHSFQDPGLIHGQTQAGANQTQTPSNDQSLFSGSTQVGFEANYPRIVTWNSDASIDMNRTGFMVNSPALLGQGGSAAFSQRGTLQSSFSPSLRPWSEIPMASSEHHKSQPIQQASIFGSRFLSDALPGFCIPARIQGEDGVGPDKPSSSSPNSHH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1766 343 MobiDBLite consensus disorder prediction 94 109 - -
Gso12g1766 343 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Gso12g1766 343 MobiDBLite consensus disorder prediction 83 109 - -
Gso12g1766 343 Pfam TCP family transcription factor 23 124 IPR017887 -
Gso12g1766 343 MobiDBLite consensus disorder prediction 322 343 - -
Gso12g1766 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 343 IPR005333 GO:0003700
Gso12g1766 343 PANTHER TRANSCRIPTION FACTOR TCP4 2 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1766 Gso-Chr12 41265291 41268550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1766 8 343 TCP Transcription Factor Family AT3G15030 42.289 1.53e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso12g1766 TCP 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1766 - - gmx:100796390 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1766 12 41265291 41268550 Gso11g3096 11 46866154 46869035 GST