Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1329 ATGGATTTGACAACATTTATCTCAACCTTATTCCTAGGCACACTAGCCTCTAGAATCATTCGACATTGGCTCATAGGAAGGTCTCTTTCTTCTCACAAGAACAAGCTTCCTCCGGGCCCACCAAGGTGGCCCATTGTTGGTAACCTCCTCCAATTAGGGCAACTTCCACATAGAGACTTAGCATCTTTATGTGACAAATATGGACCCTTAGTTTATCTAAAATTGGGTAAAATTGATGCCATCACCACCAATGATCCTGATATTATACGTGAAATTCTTCTTAGTCAAGATGATGTTTTTGCCTCTCGCCCACATACTTTTGCTGCTGTTCATTTAGCATATGGGTGTGGTGATGTTGCATTGGCCCCTCTAGGCCCTCATTGGAAGCGCATGAGAAGAATTTGCATGGAACATTTGTTAACAACAAAGAGGCTTGAGTCTTTCTCAAACCACCGTCTAGATGAAGCTCAACATCTTGTCAAGGATGTTATGGCCTGGGCCCAAGATAAAAAGCCCATTAACTTGAGGGAGGTTTTGGGTGCTTTCTCAATGAACAATGTCACTAGAATGCTGTTGGGAAAACAATATTTTGGGTCTGAATCTTCAGGCCCACAAGAGGCTATGGAGTTCATGCACATAACCCATGAGTTGTTTTGGTTGCTGGGTGTCATATATTTGGGTGACTACTTGCCAATTTGGAGGTGGGTGGATCCTTATGGGTGTGAAAAGAAAATGAGGGAAGTGGAAAAAAGAGTGGATGATTTTCATTCTAACATTATTGAAGAGCATAGAAAAGCAAGGAAAGATAGGAAGGGTAAAAGAAAGGAGGGTGATGGAGATATGGATTTTGTGGATGTTTTACTATCTTTGCCTGGTGAAGATGGAAAAGAGCACATGGATGATGTAGAAATCAAAGCCTTGATTCAGGATATGATAGCTGCAGCAACTGATACTTCAGCCGTTACCAATGAATGGGCAATGGCAGAGGTAATGAAACACCCACACGTTCTCCACAAAATCCAAGAAGAACTTGACACAATAGTTGGCCCAAACAGAATGGTGCTAGAATCCGACCTACCCCATCTTAATTACCTGCGATGCGTCGTACGCGAAACCTTCCGCATGCACCCAGCAGGGCCCTTCCTCATTCCACATGAATCTCTCCGTGCCACCACCATCAACGGCTACCACATACCCGCCAAGACACGTGTCTTCATCAACACGCACGGATTGGGCCGCAACACCAAGATTTGGGACAATGTGGATGAGTTTAGGCCTGAGAGGCATTGGCCTAGTAATGGGAATGGTACTAGGGTTGAGATTAGTCATGGGGTTGACTTCAAGATATTGCCTTTTAGTGCTGGCAAGCGCAAGTGCCCTGGTGCACCACTCGGGGTGACTTTGGTTTTGATGGCTTTGGCTAGATTATTTCATTGCTTTGACTGGGAACCACCAAAAGGATTGAGTTGTGGAGATGTTGATACTAGGGAAGTTTATGGGATGACTATGCCTAAGGCTGAGCCCTTGATTGCTATTGCTAAACCAAGGTTGGCTAAGCATTTGTATGATTGA 1572 0.4434 MDLTTFISTLFLGTLASRIIRHWLIGRSLSSHKNKLPPGPPRWPIVGNLLQLGQLPHRDLASLCDKYGPLVYLKLGKIDAITTNDPDIIREILLSQDDVFASRPHTFAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFSNHRLDEAQHLVKDVMAWAQDKKPINLREVLGAFSMNNVTRMLLGKQYFGSESSGPQEAMEFMHITHELFWLLGVIYLGDYLPIWRWVDPYGCEKKMREVEKRVDDFHSNIIEEHRKARKDRKGKRKEGDGDMDFVDVLLSLPGEDGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVMKHPHVLHKIQEELDTIVGPNRMVLESDLPHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYHIPAKTRVFINTHGLGRNTKIWDNVDEFRPERHWPSNGNGTRVEISHGVDFKILPFSAGKRKCPGAPLGVTLVLMALARLFHCFDWEPPKGLSCGDVDTREVYGMTMPKAEPLIAIAKPRLAKHLYD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1329 523 Pfam Cytochrome P450 37 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PANTHER CYTOCHROME P450 703A2-RELATED 15 522 - -
Gso12g1329 523 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1329 523 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 15 522 - -
Gso12g1329 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gso12g1329 523 Gene3D Cytochrome P450 25 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1329 Gso-Chr12 31536828 31539413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1329 45 522 EF-hand Containing Proteins AT1G01280 79.749 0.0 793