Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1255 ATGTCGTCCTCCACCGTCGCCGGCGCGGACACTCCCACTCCGTCAAAAACCCAGTCGAAGCGCAGGAGGAGCCACGCCGATTTGACGTCCAGATTCGAGGCCTACAACCGGCTCCAGGGCGCGGCCGTGGCCTTCGGCGAGACGCTGCCGATCCCGGAGATTGTGGCTGTCGGGGGCCAGTCCGACGGGAAGAGCTCCCTCCTGGAGGCGCTCCTCGGGTTCCGTTTCAACGTCCGCGAGGTCGAGATGGGCACTCGTAGACCTCTTATACTGCAAATGGTCCACGATGCTTCCGCTCTCGAACCCCGTTGCCGCTTCCAGGAGGAGGATTCAGAAGAGTATGGAAGTCCTGTGGTTTTGTCATCTGCCATTGCAGACATTATAAAGTCCCGAACTGAGGCACTTTTGAAGAAAACCAAGACAGCAGTTTCTCCTAAGCCAATTGTAATGAGAGCTGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAACCAGATAACACGCCTGATGAAATCCTTTCTATGGTGAAGTCCTTGGCTAGTCCTCCTCACCGCATACTCTTGTTCCTCCAGCAAAGTAGTGTTGAGTGGTGCTCCTCATTGTGGTTGGATTCTATTCGCGAAATTGACCCAACATTTAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTCAAGGAATTTAGTGACCGGTGGGAAGTGGATCGCTATTTGAGTGCGAGTGGTTACCTTGGAGATAACACTCACCCCTTTTTTGTGGCCCTGCCAAAGGACAGGGGTAATGTTTCAAATGATGAGTTCCGCAGGCAGATTTCTCAGGTAGATTCAGAGGTTCTTCATCATCTCCAAGAGGGTGTCAAGGGAGGTTTTGATGAAGAAAAGTTCAAGTCCTATATTGGTTTTGGCCGTCTGAGAGATTATTTGGAGTCTGAGCTTCAGAAAAAATACAAAGAAGCCGCCCCAGCAACCCTTGCTTTACTCGAGCAACGCTGCAGTGAATTGACTTCTGAACTTGCTAGAATGGATTCAAAAATACAGGCCACTTCAGATGTTTCCCATCTCAGGAAATCTGCAATGCTGCATGCAGCTTCTATCAGCAATCATGTGGGTGCATTGATTGATGGTGCAGCAGATCCTTCCCCTGAGCTGTGGGGGAAAACAACTGTAGAAGAGAGGTCACGAAGTGGTATTGGGGTTTGGCCTGGTGTTACTGCTGATGTAAATCCCCCCAATGCTACTCTTCGTCTTTATGGGGGTGCTGCATTTGAGAGGGTGATGCATGAGTTTCGCTGTGCTGCATATTCCATAGAATGCCCCTCAGTGTCAAGAGAGAAGGTTGCAAATATATTACTTGCTCATGCTGGCCGAGGTGGGGGAAGAGGAATAACAGAGGCTGCTGCAGAGATTGCACGAGCTGCTGCTAAATCATGGCTTGCTCCTCTTCTTGACACTGCTTGTGACCGGCTTTCTTTTGTCTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAACTGCAGTCATGATTCAGAATGTGGTATTAAAGGAGATGACATGGATGGCTATGTAGGTTTCCATGCTGCTTTAAGGTGTGCTTATAATCGCTTCATAGGGGATCTTGCTAAGAAGTGCAAGCAACTTGTTAGGCACCACCTTGATTCAGTTACTAGTCCATACTCACAGGTTTGCTATTTTAATGACTTTCAACCATGTTCTGGCCCAAATGCACTCTCTTATAGCAAAGTCCTTGAGTTGAGTGATACTAGTTCAGCTTCCCGTGATGTAAGGAGGGATCAGGAAAATATACCTCCCGAAAAAAATGCTCAAGAAACCACACCAGGTAAAACAGGAGAAACCAGAGATGTTTTGAGAGAAAGTCACATAACTATCCCTGAGACCCCATCTCCAGATCAGCCAGGTGATGCAGCATTTGGGGTGGTTAAAAAGGAGCCTGGAATTTGCAATGACATGGGGCCAAGAAAGAGAGCGTCCAGAATGGGTGGGAATAGCAAAAATTCTGACAATGTTAGACTGCAAAATGGTGTCATTTTATTTGGAAATGGGGAGAGATCAGGTTCACCTTACTCAGATATCTGTGTTTCAGCTGCCCAGCATTTTGCACGTATTCGTGGAGTTCTTGTTGAGAGAGGCGTGACATCAACATTAAATTCTGGATTCCTAACCCCTTGCCGAGATCGGCTATTCGTGGCTCTTGGCTTAGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTTGCTCCGGGTGCCATAGATGTGCTAGAAAGTGAACGAGAGTCTCTCTCAAAGCGTCAGAAGATACTCCAGTCTTGCTTGAATGAGTTTAAAAACGTTGCTCGGGCACTATGA 2415 0.4737 MSSSTVAGADTPTPSKTQSKRRRSHADLTSRFEAYNRLQGAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDASALEPRCRFQEEDSEEYGSPVVLSSAIADIIKSRTEALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPDNTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDNTHPFFVALPKDRGNVSNDEFRRQISQVDSEVLHHLQEGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSELTSELARMDSKIQATSDVSHLRKSAMLHAASISNHVGALIDGAADPSPELWGKTTVEERSRSGIGVWPGVTADVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGGRGITEAAAEIARAAAKSWLAPLLDTACDRLSFVLGSLFDLALERNCSHDSECGIKGDDMDGYVGFHAALRCAYNRFIGDLAKKCKQLVRHHLDSVTSPYSQVCYFNDFQPCSGPNALSYSKVLELSDTSSASRDVRRDQENIPPEKNAQETTPGKTGETRDVLRESHITIPETPSPDQPGDAAFGVVKKEPGICNDMGPRKRASRMGGNSKNSDNVRLQNGVILFGNGERSGSPYSDICVSAAQHFARIRGVLVERGVTSTLNSGFLTPCRDRLFVALGLDLFAVNDEKFMDMFVAPGAIDVLESERESLSKRQKILQSCLNEFKNVARAL* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1255 804 MobiDBLite consensus disorder prediction 601 633 - -
Gso12g1255 804 PANTHER DYNAMIN 28 803 IPR022812 -
Gso12g1255 804 Gene3D - 19 384 IPR027417 -
Gso12g1255 804 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 48 335 IPR030381 GO:0005525
Gso12g1255 804 Pfam Dynamin family 54 234 IPR045063 -
Gso12g1255 804 MobiDBLite consensus disorder prediction 1 15 - -
Gso12g1255 804 PRINTS Dynamin signature 51 69 IPR022812 -
Gso12g1255 804 PRINTS Dynamin signature 76 93 IPR022812 -
Gso12g1255 804 PRINTS Dynamin signature 154 171 IPR022812 -
Gso12g1255 804 PRINTS Dynamin signature 223 239 IPR022812 -
Gso12g1255 804 Coils Coil 338 358 - -
Gso12g1255 804 CDD DLP_1 49 335 IPR001401 GO:0003924|GO:0005525
Gso12g1255 804 MobiDBLite consensus disorder prediction 1 26 - -
Gso12g1255 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 343 IPR027417 -
Gso12g1255 804 PANTHER DYNAMIN-LIKE PROTEIN C 28 803 - -
Gso12g1255 804 MobiDBLite consensus disorder prediction 603 617 - -
Gso12g1255 804 SMART dynamin_3 28 262 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1255 Gso-Chr12 23097470 23104107 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1255 12 23097470 23104107 Gso6g2022 6 36229360 36236281 GST