Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0864 ATGGGTACAAGTGCATTGCTCATCTCTAACCCTAATTTCAATTTCCTCAAAGCCTACTCACTCTTCCAAATCGACCCCATCACGCTTCTCACCGCGAACGCCAACAACATCTCTTACCCAGACGTGGAGCACCACATTCTCCCTCGAAGCTCTTCCTCAAAGTCCCCATCTCCTGCTCTTGCGTCAACGACATTCGCAAATTCGTCGCTACTCACTACAAGACCCGCCCCTCCGACACCCTCCTTCATCGCTGACGTCGCCTATGCCGGCCTCGTCTCCTCCAACCAGCTCCGCGAGGCTAACTCCATTTTCGACCCTTCAGTTCTTGATGTGGGCCAAAACCTCGTCATTCCTCTCCCTTGCACCTGCTTCAATAGCTCCGATAACTCTCTCCCTGCGATTTACCTCTCTTATGTTGTTCGCCTCGTTGACACCCTTGTTGCCATTGCTGCTAGGTACTTCACGATGAATGTTAATGCCATGGGAAGCACTGCTATCAACGACGAAGATATCCTCACTGTTCAAATACCTGGTAATTAA 540 0.5056 MGTSALLISNPNFNFLKAYSLFQIDPITLLTANANNISYPDVEHHILPRSSSSKSPSPALASTTFANSSLLTTRPAPPTPSFIADVAYAGLVSSNQLREANSIFDPSVLDVGQNLVIPLPCTCFNSSDNSLPAIYLSYVVRLVDTLVAIAARYFTMNVNAMGSTAINDEDILTVQIPGN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0864 179 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 19 175 - -
Gso12g0864 179 Pfam LysM domain 91 118 IPR018392 -
Gso12g0864 179 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 19 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0864 Gso-Chr12 9563661 9564329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0864 20 174 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 56.173 3.68e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0864 - - gsj:114378675 346.28