Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3766 ATGAATAAAGTAGGGTGGAGTTTCAAGAGCTTCAAAACCTTATTGGTTGTGGCTTCTATAACCTTCCCTATTTTACTCACACTTACTCTCGTCCACCAAAACAACAACTCTGTTTCTGATCTCTTCCAAGGATTTCACGTATTGTCTGGAAGAACCCTCAATACTAATGCTACTGCTATTCTCTCGAAAGATCATGATATTATTAGAGAGTCAACTCTAGGTCCAAAGAACCATTCATTTGAAGATGGGAAGAATGCTCTGTCCCTATCTACTACTACCATTGCTAATGACAAACTCCTTGATGGACTTCTAGTTTCCTCATTTGATGAAGCATCATGCTTTAGTAGATATCAATCTTACTTGTACCGCAAAGCTTCCTCTCATAAACCTTCTAAATATCTGATATTCAAGCTACGAAACTATGAACATCTTCATCAAAGTTGTGGACCTTCTACCAAATCCTACAACAAAGTCATGCGAAAGGGCACAAAATTTAGCAAAAATGATGCTAGTACTAAGTGCAAATATCTTGTCTGGACAGCTTCCAATGGCTTAGGGAACAGGATAGTAACCTTGGTTGCAGCATTTCTTTATGCTATCCTTACAGACCGTGTTCTACTTGTCAAATTTGGTACTGATATGCACGGCCTCTTTTGTGAGCCGTTTCCTGGTACCTCATGGTTATTGCCCAGGAACTTTCCTTATTGGAAAGATCAGAAACATATTGAAACATATGAAAGCATGTTAAAGAATAACAAGGTAAACACGTCACATGAACTTTTGCCAGCATTTATTATTCTTAATCTACAGCACACCCATGATGGTCACAATAATTTTTTTCATTGTGATCAAAGTCAAGATCTTCTCCAGAGAATTCCCGTGCTGATTTTATGGTCAGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTAGACAAGATCTAAGTAAAATGTTCCCTGAGAAAGACACTGTTTTTCACCATCTGGGACGTTACCTTCTTCACCCATCAAATGAGGCATGGGAAATAATTAGAAAATTCTATGAGGCACACCTAGCTAAGGCAAATGAGAGGATTGGCCTGCAGGTTAGAGTATTTAATACTCATCGAGCACCACATCAAACCATTATCAATGAAATTATAGCCTGCACCCTTCAGCATAAATTGCTGCCTGATTTCGACATGCAAAAGTCAGCAACTTCTCCTTTGAAGAAGCCCTCAAAAGCTGTTCTAGTAGCATCTTTATTCTCAGAATATGGTCAGAAGCTGAGGACTATGTATCAGGCAAATACAACTGTGACCAGGGAAGTAATAAGAGTTTATCAGCCAAGTCATGAAGAGCGTCAAAAGTCAAATAATGACATGCACAACATTAAGGCATGGACAGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCGAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGCGTATGGGGAAACCATCCCAGATCCACCTTGTCGTCGAGCTAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGCCTTAG 1584 0.3939 MNKVGWSFKSFKTLLVVASITFPILLTLTLVHQNNNSVSDLFQGFHVLSGRTLNTNATAILSKDHDIIRESTLGPKNHSFEDGKNALSLSTTTIANDKLLDGLLVSSFDEASCFSRYQSYLYRKASSHKPSKYLIFKLRNYEHLHQSCGPSTKSYNKVMRKGTKFSKNDASTKCKYLVWTASNGLGNRIVTLVAAFLYAILTDRVLLVKFGTDMHGLFCEPFPGTSWLLPRNFPYWKDQKHIETYESMLKNNKVNTSHELLPAFIILNLQHTHDGHNNFFHCDQSQDLLQRIPVLILWSDQYFVPSLFMIPSFRQDLSKMFPEKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLAKANERIGLQVRVFNTHRAPHQTIINEIIACTLQHKLLPDFDMQKSATSPLKKPSKAVLVASLFSEYGQKLRTMYQANTTVTREVIRVYQPSHEERQKSNNDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILQRAYGETIPDPPCRRAKSMEPCFHYPPKP* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3766 527 Gene3D - 343 497 - -
Gso11g3766 527 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 526 - -
Gso11g3766 527 Gene3D - 171 224 - -
Gso11g3766 527 Pfam Xyloglucan fucosyltransferase 95 525 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gso11g3766 527 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 526 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3766 Gso-Chr11 53292636 53296119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3766 90 525 Xyloglucan Fucosyltransferase1 AT2G03220 51.357 1.45e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3766 K13681 - gmx:100799776 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3766 11 53292636 53296119 Gso8g1829 8 17916250 17921687 PCT
Gso8g1829 8 17916250 17921687 Gso11g3766 11 53292636 53296119 PCT