Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2973 ATGGCCACCGTGCAACTCCAATCCCTAACCCTTGTTCGCTCCTCAGCACTTCCTTCCGCCACCTTCTCCCCTCCGATCGCCGTCTCCGGCCGCCGCAACTCCGCCGCGCTGCCGCGCTACTCCGGCCTCCGGCTCCGACCCGCCGCTGAGACCAGTTTCCCGACTCACGCCAGCTCGAGAACCGCTTCTCGCGGCGGAGGTGTCAAGTGCGAGGCAGGAGACACCGCTGTTGAAGTTGCTCCCGTTACTGATGCAAATTGGCAATCACTTGTGATTGAATCCGAGTCTCCTGTACTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGTATGATCCACCCGATAATTGACGAGCTGGCAAAAGAATATACTGGTAAGCTAAAGTGCTACAAACTCAATACTGATGAGAGCCCTTCAACTGCTACTAAGTACGGGATTCGAAGTATCCCAACTGTCATTATTTTCAAGAATGGTGAGAAGAAAGATACAGTTATAGGAGCTGTGCCCAAGACAACATTGACCTCAAGCATTGAAAAATTCTTGTGA 549 0.5319 MATVQLQSLTLVRSSALPSATFSPPIAVSGRRNSAALPRYSGLRLRPAAETSFPTHASSRTASRGGGVKCEAGDTAVEVAPVTDANWQSLVIESESPVLVEFWAPWCGPCRMIHPIIDELAKEYTGKLKCYKLNTDESPSTATKYGIRSIPTVIIFKNGEKKDTVIGAVPKTTLTSSIEKFL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2973 182 CDD TRX_family 85 179 - -
Gso11g2973 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
Gso11g2973 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
Gso11g2973 182 PRINTS Thioredoxin family signature 98 106 - -
Gso11g2973 182 PRINTS Thioredoxin family signature 106 115 - -
Gso11g2973 182 PRINTS Thioredoxin family signature 146 157 - -
Gso11g2973 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 182 - -
Gso11g2973 182 Gene3D Glutaredoxin 79 182 - -
Gso11g2973 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Gso11g2973 182 PANTHER GEO12009P1 1 182 - -
Gso11g2973 182 Pfam Thioredoxin 79 179 IPR013766 -
Gso11g2973 182 SUPERFAMILY Thioredoxin-like 78 182 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2973 Gso-Chr11 45523777 45526500 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g2973 11 45523777 45526500 Gso12g1250 12 22897447 22899915 PCT
Gso11g2973 11 45523777 45526500 Gso6g2054 6 37937286 37940560 PCT
Gso12g1250 12 22897447 22899915 Gso11g2973 11 45523777 45526500 PCT
Gso6g2054 6 37937286 37940560 Gso11g2973 11 45523777 45526500 PCT