Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2604 ATGCATTTCCTTTCAACTATTCCTCAAACACTAGCAATGATTTGGCTCTTTTATTTACTCATCTCTCTTGGTCTCATTAGTGGCTACCAAAATGAAGCTACAAATGCAAATAACAAAGTTATATCTATTGGGGCTATCATTGATGTTAATTCTCGCATTGGGAAAGAACAGCAAGTAGCCCTGGACATTGCTGCTCAAAGTTACAATAGCACTTCAAGGACCTACAAGTTGGCTCTCTATTTTCGGAACTCCACCAAGGATCCCCTCAGAGCCATCACTCTTGTTGAAGAGATGATTTATAAGCAAAAGGTGCAAGTGATTATAGGGATGCACAAATGGTCAGAAGCAGCTCTAGTGGCTGAAATAGGAAGCCAAGCTCAAGTTCCTATCATAGCATTTGCAGAACCTACAATTACCCCACCATTGATGACAGAGCGATGGCCTTTTTTGGTGAGACTGGCTAACAGTAGTACAACATATATCAAATGTATTGCAGATATAGTGCAAACTTATAATTGGCAGAGAGTAGTTGCCATCTATGAAGATGATGCATATGGTGGAGATTATGGTATGCTAGCACTGCTATCTGAGGCCCTCCAGGATGTAGGTTCAATGATTGAATACCACTTAGTTCTTCCACCTATTTCTTCTCTACATGATCCAGGCGGGCTTGTACGTGAAGAGTTGCTTAAGTTGTGGCAAACACAATCTCGTGTGTTCATTGTGCTGCAATCTTCATTTGAAATGGCGATTCATTTGTTTAAAGAAGCCTCAAAAATGGGACTCGTGGACAAAGAATCAGTTTGGATACACCCAGAGAGCATAACTAATTTGCTGGACTCTGTCAACAAGTCTTCTATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCCGAAAACAGCACTGAGTACCAAGATTTTGAGGCTCAATTCCGGAAAAAATTTTGGCCTAAGAATGCTGAGGAAGATAATCGCTACCCAGGATTTTATGCTTTGCAAGCATATGACAGCATTAAAATTGTGACTCAAGCAGTAGACAGAATGGCCGGTAGAAACACTAGCAGCCCAAAGAATTTACTAAGAGAAATACTGTCTAGCAACTTTCTTGGTTTAAGTGGTCAAATTCAATTTGAAGATGGACAACTCCTGCAGAATCCTATTTTGAGGATAGTAAATGTGGCTGGGAGGAGTTACAAGGAAGTATGCTTTTGGAGTCAACAACATGGGTTCACCACAAACCTCCCTATAGGACAAGGTGGATATAATGTTGCAGGTAATACAAAATGTTTCAATGGTGTACGTTGGCCCGGGGATCTGAAGCATGATCCAAAGGGCTGGAAAATGCCTACTAAACAAAATCCATTGAGAATCGCAGTCCGAAACAGAACCTCATTTTCCAAGTTTGTCAACTATGATCAGAATAAAAAAATATATAGTGGATTCTGCATTGATATTTTTCAGAGTGTGCTCCCCCTTTTGGGGTATGACTTGCCATATCAATATTATCCCATTGATGGAACCTATAATGATTTGGTTCAGCTTGTTTATAACAAGACTTATGATGCTGTCGTTGGGGACATGACCATACTAGAGGAAAGAATGCAGTACGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCATCAAAGTCAGAAGAGTCAGCATGGATGTTCACAAAGCCCTTTACCTGGGAACTGTGGATGGTTACAGGTGCCATTTTGATTTACACAATGTTAGCAGTTTGGTACCTTGAGAGAGAATCCAATCCTGAGTTTCATGGCAATTGGAAGAGCCAGATCAGTACAGCTCTTTGGTTTACCTTCTCGTCTCTGTTCTTCGCTCATAGGGAAAAAATGAGTTGCAACTTAACTCGTATGGTGATGGTCTCATGGCTCTTGCTAGTTCTGATCCTTACTTCATGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTTAAACAACTGCAACCAAATGTCACAGACATTCAGTGGTTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTCGGTCGTTCCTGGAGAAAGTAGAAAATTTTAAGCCTGAGAACATCATAAATGTTACTGATGAATACAACTACGATGGTGCGTTTAAAAATAACAGTATAGCAGCTGCCTTTCTTGAACTCCCATATGAAAAGGTGTTCATAAGTGAATGCTGCAACAGATACATTGGTTTCACTCCCAGAACCAGATTTGGAGGACTGGGCTTTATGTTCCAGAAAGGCTCGCCACTGGCCAGAGACGTGTCAAAAGCTATATTACATCTCTCAGAAAAAAAAGCAGAGCTGAAGAGATTGGAAGAGAAGTGGTTGATTACCTCACCGGCATCATGCTCCAACGTGACCTCCGATGATACGGACAGTTTGAAGCTGAGAAGTTTATGGATTCTATATGTCATCTCAGGTGCCACTTCCACCATTTGTGTGCTACTATCAGCCATCCAGTCTCTAGTAAAATCCTGTCACCAATGTCAAGCAGTGGCACCAGAAGGCAATGACACACCAAGTGATCATAAAGTGTGGGAAAAGGTGATTACACATGCAAAACAGATTTTTAACAAAAAGATCAATAATTCAAGTGAGGCACAGGAACAGGTTGTGACTGATTGTTCTTTGAGATGGGATCGCGTGAACATGACTGTTTCCCCTGAGCATCAGCAGGAAATGGCTTCTCCGCTACCCGGAATTTTAATGCTACCTTCTCCACCCCCAGAGGTTCAGATGACAACTCATGATTTAGGAATCACCAACACTTCAAAGTAG 2820 0.4121 MHFLSTIPQTLAMIWLFYLLISLGLISGYQNEATNANNKVISIGAIIDVNSRIGKEQQVALDIAAQSYNSTSRTYKLALYFRNSTKDPLRAITLVEEMIYKQKVQVIIGMHKWSEAALVAEIGSQAQVPIIAFAEPTITPPLMTERWPFLVRLANSSTTYIKCIADIVQTYNWQRVVAIYEDDAYGGDYGMLALLSEALQDVGSMIEYHLVLPPISSLHDPGGLVREELLKLWQTQSRVFIVLQSSFEMAIHLFKEASKMGLVDKESVWIHPESITNLLDSVNKSSISYMEGALGIKTYYSENSTEYQDFEAQFRKKFWPKNAEEDNRYPGFYALQAYDSIKIVTQAVDRMAGRNTSSPKNLLREILSSNFLGLSGQIQFEDGQLLQNPILRIVNVAGRSYKEVCFWSQQHGFTTNLPIGQGGYNVAGNTKCFNGVRWPGDLKHDPKGWKMPTKQNPLRIAVRNRTSFSKFVNYDQNKKIYSGFCIDIFQSVLPLLGYDLPYQYYPIDGTYNDLVQLVYNKTYDAVVGDMTILEERMQYVDFTVPYAESGLSMIVPSKSEESAWMFTKPFTWELWMVTGAILIYTMLAVWYLERESNPEFHGNWKSQISTALWFTFSSLFFAHREKMSCNLTRMVMVSWLLLVLILTSCYTASLSSMLTVKQLQPNVTDIQWLKRNNMKIGCDGDSFVRSFLEKVENFKPENIINVTDEYNYDGAFKNNSIAAAFLELPYEKVFISECCNRYIGFTPRTRFGGLGFMFQKGSPLARDVSKAILHLSEKKAELKRLEEKWLITSPASCSNVTSDDTDSLKLRSLWILYVISGATSTICVLLSAIQSLVKSCHQCQAVAPEGNDTPSDHKVWEKVITHAKQIFNKKINNSSEAQEQVVTDCSLRWDRVNMTVSPEHQQEMASPLPGILMLPSPPPEVQMTTHDLGITNTSK* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2604 939 Gene3D - 563 702 - -
Gso11g2604 939 Gene3D - 704 798 - -
Gso11g2604 939 Gene3D - 156 410 - -
Gso11g2604 939 PIRSF IGluLR_plant 10 911 IPR017103 -
Gso11g2604 939 Gene3D - 43 387 - -
Gso11g2604 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 913 - -
Gso11g2604 939 Coils Coil 768 788 - -
Gso11g2604 939 Pfam Receptor family ligand binding region 59 397 IPR001828 -
Gso11g2604 939 Gene3D - 441 562 - -
Gso11g2604 939 SUPERFAMILY Periplasmic binding protein-like I 36 448 IPR028082 -
Gso11g2604 939 Pfam Bacterial extracellular solute-binding proteins, family 3 471 790 IPR001638 -
Gso11g2604 939 Pfam Ligand-gated ion channel 791 821 IPR001320 GO:0015276|GO:0016020
Gso11g2604 939 CDD PBP1_GABAb_receptor_plant 42 417 IPR044440 -
Gso11g2604 939 SUPERFAMILY Periplasmic binding protein-like II 438 791 - -
Gso11g2604 939 CDD GluR_Plant 456 790 - -
Gso11g2604 939 SMART GluR_14 459 792 IPR001320 GO:0015276|GO:0016020
Gso11g2604 939 PANTHER GLUTAMATE RECEPTOR 3.4 21 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2604 Gso-Chr11 42016064 42021383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2604 30 841 Ion Channels AT2G29120 32.506 4.03e-136 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2604 - - gmx:100818619 1893.24