Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2577 ATGGCCGAGGAGTCTCAAGGGATTAAGCTGTTTGGTGCAATGATTACATTGAACCGTGGGGAAGTAAACAAAGGAGAAAAGGGAAGCGAATATGAGAGGGTGGAGAAGAGAGCAGAGAAGATAATACCCTGTCCGAGATGCAAGAGCATGGAAACTAAGTTCTGTTACTTCAATAACTACAACGTTAATCAGCCAAGGCATTTCTGCAAGAGCTGCCAGAGGTACTGGACGGCTGGTGGGGCCCTCCGAAACGTCGCGGTGGGCGCCGGTCGCCGGAAGGTTAAGTCACCGTGCCATGGAGCCGGTGTCTATGAAAGTACTTCTGAAGATGAAAACAAGTTTGAGATGGGTCAGGGACACGTTGCCATGCCCAACACTGGTTTCCGGCAGATTTTTCAGGCCAAGCGGCAGAGGATCACCTCAGCATCAAGGTCAATAAAATCATCTACGAAAACACAACTTGGAATTATCATGAAACAAGAAGAAAAGACCTGA 495 0.4828 MAEESQGIKLFGAMITLNRGEVNKGEKGSEYERVEKRAEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKVKSPCHGAGVYESTSEDENKFEMGQGHVAMPNTGFRQIFQAKRQRITSASRSIKSSTKTQLGIIMKQEEKT* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2577 164 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Gso11g2577 164 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Gso11g2577 164 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Gso11g2577 164 PANTHER CYCLIC DOF FACTOR 2 4 145 IPR045174 GO:0003700|GO:0006355
Gso11g2577 164 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 4 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2577 Gso-Chr11 41819824 41821905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2577 3 145 C2C2-Dof Transcription Factor Family AT1G29160 47.953 2.73e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso11g2577 zf-Dof 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2577 - - gsj:114374951 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0702 15 6281799 6283781 Gso11g2577 11 41819824 41821905 GST