Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2333 ATGGACGAGAATAGAAGTTCCAACGAACCCAACAAGTGGAAGATGCCTCTCTTCGTTTTCTTCAAAGATGCAAGGAATGTTTTCAAGCTGGATGCTCTATCTCGGGAGATATTAGGGATTGCACTCCCCTCAGCACTGGCCGTTTCTGCTGATCCAATTGCTTCTCTCATAGACACAGCATTCATAGGCCGTTTAGGACCGGTGGAACTTGCAGCTGCTGGAGTTTCCATTTCTTTGTTTAACCAAGCTTCGAGGATTACCATATTCCCTCTGGTCAGCATTACCACTTCCTTTGTGGCTGAAGAAGATACCATTCAAAAACTGAACACCAAAGCAGCTGAAAATGGTAATAGTAAGGCCAAGTTCGGCGAAACAATTGTGCCAGAGGATCATATGCTTCAAGACATGGAAAAAGGTACCCCCAAAGTGATGAATACTGACGCTCCAACAGAATTTAGGGAAGAAAAAGATGAATCAAAGGAATATAATGCTACCGGCAACAATGACACAAATATTGGAGATGGAGCCAATACAATATGCAAGTTTTCATCGGTTACTAGCAGTAAGAAGAGTAAGGACAAAGTTGGAAAGAAAAAGCGACTTATTGCTTCAGCATCAACAGCACTACTTTTTGGCACAATCCTTGGTCTCATTCAAGCTGCAGTTCTTATATTTGCAACCAAACCTCTGTTAGGTGTTATGGGTGTCAAACGAGATTCTCCTATGCTAAAACCTGCAGAGAGCTACTTAAGATTGAGATCGTTCGGGGCACCAGCAGTACTTCTCTCCTTGGCCATGCAAGGCATCTTTCGAGGGTTCAAGGATACAACAACTCCTTTATATGTCATCGTTTCGGGATATGCATTGAATGTCATATTGGACCCAATTTTTATTTTCACATTGAAGTTAGGCATCAAAGGTGCAGCCATTGCACATGTTCTCTCCCAGTACATGATGGCATTCACTCTCTTATTGATATTAATGAAAAAAGTGCATCTCCTACCTCCAAGAATAAAGGATTTACAGATTTTCCGATTTCTTAAAAATGGAGGATTGTTGATGCTAAAGGTAATAGCAGTCACATTTTGTGTTACCTTAGCAACATCATTGGCTGCAAGGCTAGGTTCAATTCCCATGGCTGCATTTCAAACATGCCTACAGGTCTGGATGACATCGTCCCTTCTTGCAGATGGTTTGGCTGTTGCTGTTCAGGCAATTCTAGCTTGTTCTTTTACTGAGAAAGACTATAAGAAAGCAACAGCAGCAGCAACAAGGACACTGCAAATGAGTTTTGTTTTGGGAGTGGGGCTCTCTCTTGCTGTTGCACTTGGATTATACTTTGGAGCTGGAGTGTTTTCAAAAGATGCTCATGTTGTGCACTTAATTAAAATAGGCATCCCGTTTGTGGCTGCTACTCAACCAATCAATTCATTAGCCTTTGTATTTGATGGAGTGAACTATGGAGCTTCTGATTTTGCATATTCAGCATACTCTCTGGTTCTGGTGTCACTAGTAAGCGTAGCCACAGAATTCATTCTCTACAGGACCAAACATTTCGTTGGGATTTGGATTGCATTAACCATCTATATGACTCTTCGCATGTTGGCTGGTATATGGAGGATGGGAACTGGGACAGGACCTTGGCTCTATCTCAGAGGTCGCTCACTGCCTTAG 1674 0.4229 MDENRSSNEPNKWKMPLFVFFKDARNVFKLDALSREILGIALPSALAVSADPIASLIDTAFIGRLGPVELAAAGVSISLFNQASRITIFPLVSITTSFVAEEDTIQKLNTKAAENGNSKAKFGETIVPEDHMLQDMEKGTPKVMNTDAPTEFREEKDESKEYNATGNNDTNIGDGANTICKFSSVTSSKKSKDKVGKKKRLIASASTALLFGTILGLIQAAVLIFATKPLLGVMGVKRDSPMLKPAESYLRLRSFGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYALNVILDPIFIFTLKLGIKGAAIAHVLSQYMMAFTLLLILMKKVHLLPPRIKDLQIFRFLKNGGLLMLKVIAVTFCVTLATSLAARLGSIPMAAFQTCLQVWMTSSLLADGLAVAVQAILACSFTEKDYKKATAAATRTLQMSFVLGVGLSLAVALGLYFGAGVFSKDAHVVHLIKIGIPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVLVSLVSVATEFILYRTKHFVGIWIALTIYMTLRMLAGIWRMGTGTGPWLYLRGRSLP* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2333 557 PANTHER MATE EFFLUX FAMILY PROTEIN 10 552 - -
Gso11g2333 557 Pfam MatE 196 296 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso11g2333 557 Pfam MatE 354 510 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso11g2333 557 CDD MATE_DinF_like 35 543 IPR044644 -
Gso11g2333 557 TIGRFAM matE: MATE efflux family protein 43 523 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso11g2333 557 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 10 552 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2333 Gso-Chr11 39289364 39295610 Dispersed/Wgd