Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2329 ATGGAGTCGGAAGGGGAAGCTGGGGCAAAACCAGTGACAGCATTGGGTGCCCAAGTGTGCCAGATTTGTAGTGATGGTGTTGGGAAGACTGTGGATGGTGAACCGTTCGTTGCGTGCGACGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAGGGAAGTCCTGCAATTCTTGGAGACATGGAAGAGGATGGTGCTCCTGCTGCTGATGGTGCCAGCGACTTCAATTATGATTCAGAAAATCAAAATCAAAACCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTGAGCTGGCAATTGACATACTCACGAGGAGAGGAGGTTGGTGCTCCAAATTATGATAAGGATGTTTCTCACAACCACATTCCTCTACTGACCAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCACCCGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGCGGAAAGCGTGTCCATAATATTCCATATTCATCTGACATTAATCAATCTCCAAATATCAGGGCCGGGGATCCAGGATTGGGTAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGAGCACAGGCCTGGCGGCTTCTGAAAGAGGAGCTGGAGATGTTGATGCTAGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCCAGGAAGGTTTCTATTCCATCATCTAGGATAAATCCATATCGTATGGTCATTATGCTGCGGCTGGTTATCCTTTGCATTTTCTTGCATTATCGGATAACGAATCCAGTGCCCAATGCCTATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCTGTAAACCGTGAAACATATCTCGACAGGCTTGCACTAAGGTATGATCAAGAAGGAGAACCATCGCAACTAGCTGCTGTTGACATTTTCGTCAGTACTGTTGACCCATTAAAGGAGCCCCCACTTGTGACTGCCAATACCGTACTATCTATTCTTGCAGTTGACTATCCAGTGGATAAGGTCTCCTGCTATGTGTCAGATGATGGTGCTGCTATGTTGACATTTGAAGCACTTGCTGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTTAGCAAGAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTATTTTGCTCAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAGTTTAAAGTTCGTGTTAATGGACTTGTTGCAAAGGCACAGAAAGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACCCCGTGGCCTGGAAATAACATCAGAGACCATCCAGGAATGATTCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCATAAGAAAGCTGGTGCCATGAATGCACTTGTTCGAGTATCTGCAGTCCTTACCAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCAAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACAGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCACAAAAAGCCTGGGTTGTTATCATCACTCTGTGGTGGAAATCGGAAGAAGAGTTCAAAATCTAGCAAGAAAGGAACAGACAAGAAAAAATCTAACAAGCATGTTGACCCAACTGTGCCTATTTTTAATCTAGAGGATATAGAAGAAGGAGTAGAAGGTACTGGATTTGATGATGAAAAATCACTACTTATGTCACAAATGAGTCTTGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACGCTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAAACTGATTGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACCGGATTTAAGATGCATGCCCGCGGTTGGCGGTCTATATACTGCATGCCTAAGCGCCCAGCGTTTAAAGGTTCTGCTCCCATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCCGTGGAAATTCTCTTTAGCCGGCACTGTCCCATCTGGTATGGTTATGGTGGAAGGTTGAAGTGGCTTGAAAGGTTTGCATATGTGAACACCACAATCTATCCAGTCACTGCCATTCCCCTACTCATTTATTGTATCTTGCCTGCTGTCTGTTTGCTGACTAACAAGTTCATTATTCCTCAGATCAGTAACCTTGCAAGCATATGGTTCATCTCCCTCTTCCTTTCCATCTTTGCTACTGGAATCCTGGAGATGAGGTGGAGTGGCGTTGGAATCGACGAGTGGTGGAGGAACGAACAGTTTTGGGTCATTGGTGGTGTCTCGGCGCATCTCTTTGCTGTCTTCCAAGGCCTGCTCAAAGTGCTTGCTGGAATTGACACCAACTTTACTGTCACCTCCAAGGCCTCGGACGAAGATGGAGACTTTGCCGAGCTCTACATGTTCAAATGGACCACCCTTCTCATCCCCCCCACAACCCTTCTCATAATAAACATGATTGGGGTGGTTGCCGGCATCTCCTATGCCATCAATAGTGGCTACCAATCTTGGGGACCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTATACCCTTTCCTCAAAGGTCTCATGGGGCGCCAAAACAGAACACCGACCATTGTGGTGGTGTGGTCCATTCTTCTTGCATCCATTTTCTCACTCTTGTGGGTTAGAATTGATCCATTCACCACAAGGGTCACTGGTCCTGATGTTGAGGAGTGTGGCATTAACTGCTAG 3243 0.449 MESEGEAGAKPVTALGAQVCQICSDGVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDMEEDGAPAADGASDFNYDSENQNQNQNQKQKISERMLSWQLTYSRGEEVGAPNYDKDVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGLAASERGAGDVDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNIRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGNRKKSSKSSKKGTDKKKSNKHVDPTVPIFNLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINMIGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEECGINC* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2329 1080 MobiDBLite consensus disorder prediction 650 685 - -
Gso11g2329 1080 SUPERFAMILY RING/U-box 5 88 - -
Gso11g2329 1080 MobiDBLite consensus disorder prediction 76 114 - -
Gso11g2329 1080 PANTHER CELLULOSE SYNTHASE 5 1080 - -
Gso11g2329 1080 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1080 - -
Gso11g2329 1080 SUPERFAMILY Nucleotide-diphospho-sugar transferases 366 880 IPR029044 -
Gso11g2329 1080 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Gso11g2329 1080 Pfam Cellulose synthase 352 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso11g2329 1080 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Gso11g2329 1080 MobiDBLite consensus disorder prediction 96 114 - -
Gso11g2329 1080 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Gso11g2329 1080 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 476 643 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2329 Gso-Chr11 39235690 39243528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g2329 11 39235690 39243528 Gso15g2260 15 51503726 51511678 PCT