Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2325 ATGTACATCAAGGAGATTTGTCTGGAAGGGTTCAAATCCTACGCGACCCGCACCGTGGTTCCGGGCTTCGACCCTTTCTTCAACGCCATCACCGGCTTGAACGGTTCCGGGAAGTCTAACATCCTGGACTCCATCTGCTTCGTCCTCGGAATCACCAACCTGCAGCAGGTCAGGGCTTCCAACCTCCAGGAACTCGTCTACAAGCAGGGCCAGGCTGGCATCACCAAGGCCACCGTCTCCGTCGTCTTCGACAACTCCAACAGCTCCAGAAGCCCTCTCGGATACGAAGGACACTCTGAGATCACAGTAACAAGACAGATTGTGGTTGGGGGGAGGAACAAGTATTTGATCAATGGGAAGCTTGCGCAGCCTAGTCAAGTTCAGAACCTTTTTCATTCAGTGCAGCTAAATGTTAATAATCCACATTTCCTTATTATGCAAGGACGCATCACTAAGGTATTAAATATGAAACCACCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACGAGAATGTATGAGACAAAGAAAGAGGCTGCTCTTAAAACACTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTAACAAGCTTCTTGACCAGGAGATACTGCCTGCTCTGGAGAAGTTAAGGAAAGAAAAGACACAGTACATGCAATGGGCTAATGGCAATGCAGAGTTAGATAGGTTGAGAAGATTTTGTATTGCTTATGAGTATGTTCAAGCGGAGAGGATTAAAGACAATGCTGCTTCTGAGGTGGAAGAAGTGAAAGCCAAGATAGCTGAGATTGATGACATTGCTAAGACAAATCAGGGGGAAATTAAGGAAATGGAGACCAAAATAGCTCAGTTGACTGCTGAAAAGGAAGCAAGCATGGGTGGAGAAATGAAATCTCTGTCAGAGAAGGTAGATGCACTTTCCCAGAATCTTGTGAGGGAAACGTCTGTACTAAATAATAAAGAAGACACTTTGAGGAGTGAAGAAGCCAACAAAGCAAATCTTGTTAAAAATATTGAAGAATTGAAGCATTCTGTAGAAGAGAAGTCCTCTGCTGTTAAAAAGGCTGAAGAGGGGGCAGCAGATCTGAAAAATAAAGTTGATGAGCTCACAAAGAGTCTAGAGGAGCATGATAAAGAATACCAGGGTGTTTTAGCTGGCAAGAGCAGTGGTAATGAGGAGAAATGCTTAGAGGATCAACTAAGGGATGCAAAGGTAGCAGTTGGGAGTACTGAAACAGAATTGAAACAGCTGAAAGCCAAAATTAGCCATTGTGAAAAGGAACTGAAGGAGAAAACAAATCAATTAAGGTCAAAACGTGAAGAAGCTAATGCTGTTGAAAATGAGCTCAACACTAGACAAAAAGATGTTGAGAACGTTAGAATGGAGTTGGAGTCTCTTTCTTATAAAGAGGGTGAGATGGAAGATTTACAAAAGGAGCGTATGACTGAGATGGACTGTATGCAAAAGTTGAAGGATGAAATACGCAATCTTTCAGCAAACCTGGCAAATGTTGAATTTACATACCGTGATCCTTCTAAGAATTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCAAAACTCATCAAAGTAAAGGATAGGTCCACAATGACTGCCCTAGAGGTTACAGCTGCTGGAAAGTTGTATAATGTTGTTGTTGACACAGAAAATACTGGAAAGCAACTACTACAGAATGGCAATCTTAGAAGAAGAGTGACAATTATACCTCTGAACAAGATACAATCCTATAATGTTTCCTCCAGAGTTCAACAAGCTGCTGTTAGATTGGTGGGCAAGGGGAATGCTGAAATAGCTCTTTCTTTGGTTGGTTATGAAGAAGAATTGCAGAGTGCAATGGAATATGTATTTGGTTCAACCTTTGTCTGCAAAACTATTGATGCTGCAAAGGAGGTGGCATTTAATCGGGAGATTCACACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGCAAGGGAGGTGGTGATCTTTTGGGGCAACTTCATGCTTTGTCTGAGGCTGAGTCAAAACTTTCAGTGCATCAAAGAAGATTGTCAGAGATTGAGGCAAAGATCTCAAAGCTCTTCCCACTTCAGAAAAAATTTATAGATCTCAAAGCACAATTAGAACTGAAGTTGTACGACCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCATAAGCTCGGAGAATTAGTGAAGAAGATTGAGCAAGAGCTTAATGAAGCAAAGTCTACAGTCAAGGACAAGCAACTTCTATATGAGGACTGTGTTAAAACTGTTTCATCTCTTGAGAAATCAATCAAAGAACATGACAATAACAGAGAGAGTAGGCTAAAAGGCTTGGAGAAAAAGATAAAGACAATCAAATCTCAAATGCAGTCATCATTAAAAGATCTGAAGGGACATGATAGTGAAAAGGAGAGACTTGTTATGGAAATGGAAGCTATTATCCAGGAGCAAGCATCTTTGGAGAACCAGTTAGCATCATTGGGAACACTGATCAGTAATCTTGCCTCTGAAGTAGAAGAACAAAGATCCACTGTTGCTGCTGCACGGGATAATCTTGATCAAGTTCAGTCACAGCTGAAATCAGTTCGTCTAAAAATGAAGGAATGTGATAAGGAAATCAGTGCTATTATTAAAGACCAGCAAAAGCTTGAACATAAAATTAGTGAGAGTAATCTTGAAAGGAAGAGGATGGAAAATGAGGTAAAACGGATGGAGTTGGAACAGAAAGATTGCTCTGTGAGAGTAGATAAATTAATAGAGAAGCATGCATGGATTGCTTCTGAAAAACAGTTGTTTGGTAGAAGTGGAACTGATTATGATTTTTCTTCCCGTGATCCTACTAAAGCTAGAGAAGAACTTGAGAAGCTTCAGGCTGAACAATCTGGGCTTGAAAAAAGGGTAAACAAGAAAGTGATGGCAATGTTTGAGAAGGCAGAAGATGAGTACAATGATTTGATGTCCAAAAAATACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAGGAGACACTTAATGTTACCTGGATCAAAGTGAATAATGACTTTGGATCCATCTTTTCTACGCTACTACCGGGAACAATGGCCAAGTTAGAACCTCCAGAAGGATGCAGCTTCCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAGCAGTCATTGTCTGAATTAAGTGGAGGTCAGCGATCACTGCTTGCACTTTCTCTGATTCTGGCACTGCTGCTGTTCAAACCTGCTCCACTTTACATCCTTGATGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCGCACTCTCAGTTTATTGTGGTTTCCTTGAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCAACTGTTCAGCGAACTGTTGCAGCTAAACAAAGCAAATGA 3531 0.4123 MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSVVFDNSNSSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKEKTQYMQWANGNAELDRLRRFCIAYEYVQAERIKDNAASEVEEVKAKIAEIDDIAKTNQGEIKEMETKIAQLTAEKEASMGGEMKSLSEKVDALSQNLVRETSVLNNKEDTLRSEEANKANLVKNIEELKHSVEEKSSAVKKAEEGAADLKNKVDELTKSLEEHDKEYQGVLAGKSSGNEEKCLEDQLRDAKVAVGSTETELKQLKAKISHCEKELKEKTNQLRSKREEANAVENELNTRQKDVENVRMELESLSYKEGEMEDLQKERMTEMDCMQKLKDEIRNLSANLANVEFTYRDPSKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAAGKLYNVVVDTENTGKQLLQNGNLRRRVTIIPLNKIQSYNVSSRVQQAAVRLVGKGNAEIALSLVGYEEELQSAMEYVFGSTFVCKTIDAAKEVAFNREIHTTSVTLEGDIFQPSGLLTGGSRKGGGDLLGQLHALSEAESKLSVHQRRLSEIEAKISKLFPLQKKFIDLKAQLELKLYDLSLFQSRAEQNEHHKLGELVKKIEQELNEAKSTVKDKQLLYEDCVKTVSSLEKSIKEHDNNRESRLKGLEKKIKTIKSQMQSSLKDLKGHDSEKERLVMEMEAIIQEQASLENQLASLGTLISNLASEVEEQRSTVAAARDNLDQVQSQLKSVRLKMKECDKEISAIIKDQQKLEHKISESNLERKRMENEVKRMELEQKDCSVRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPTKAREELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKYIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQSK* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2325 1176 Coils Coil 982 1002 - -
Gso11g2325 1176 Coils Coil 736 763 - -
Gso11g2325 1176 Coils Coil 1006 1026 - -
Gso11g2325 1176 Coils Coil 817 837 - -
Gso11g2325 1176 Coils Coil 178 198 - -
Gso11g2325 1176 PIRSF SMC 1 1156 IPR024704 GO:0005524|GO:0016887
Gso11g2325 1176 Coils Coil 845 886 - -
Gso11g2325 1176 Coils Coil 894 928 - -
Gso11g2325 1176 Coils Coil 317 379 - -
Gso11g2325 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1152 IPR027417 -
Gso11g2325 1176 Coils Coil 679 699 - -
Gso11g2325 1176 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Gso11g2325 1176 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 1174 - -
Gso11g2325 1176 Coils Coil 400 462 - -
Gso11g2325 1176 Gene3D - 1 202 IPR027417 -
Gso11g2325 1176 Gene3D - 517 677 - -
Gso11g2325 1176 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 1174 - -
Gso11g2325 1176 Coils Coil 789 809 - -
Gso11g2325 1176 Gene3D - 996 1175 IPR027417 -
Gso11g2325 1176 Coils Coil 239 287 - -
Gso11g2325 1176 Pfam RecF/RecN/SMC N terminal domain 840 1161 IPR003395 -
Gso11g2325 1176 Pfam RecF/RecN/SMC N terminal domain 2 428 IPR003395 -
Gso11g2325 1176 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Gso11g2325 1176 SUPERFAMILY Smc hinge domain 478 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Gso11g2325 1176 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Gso11g2325 1176 Gene3D - 577 667 - -
Gso11g2325 1176 Coils Coil 473 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2325 Gso-Chr11 39189486 39199722 Dispersed/Wgd