Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2323 ATGGATGAGCAAAACAGCGCCGCCGTCAACGACGGCGAACCAGAACCGCAGCAAAACCACCACCAACAAAACCACACCGACAACAACAATAACAAGAGCAACGACACCGAAAACAACAACAACGACAACGAGAAGAGTACATCAGATCCCGAACTGTTCTGTTGTTTGCTTCAGCCAGCCACCACCGACGGAGATCCCGAGTACATCGGCATTCGCCGCCTCCTCCTTCATCGGAAGGCCGAGGCCGGCGTTCTCCGCCGCAGAGATTGGAGATGCAATGGCAAAACTTACGTGGCGTATCGGAATTACATAAGTAGGCCTAGGAACTGGGAAAGGGATAGTTTGCGCACCCCGAGTCTCCAGAGTACTCCGGGAAACAGTGGCCGATGGTTTCCATCTCCAACTCCTCACGGGACCCGTTGGTCTGAGGTGGACAGCTTGAGTTGTGGGCGGGATCTGCAAAATGCAAATCCAGTATATAATCATAGAACAAGTTTTGGCTCAAGTATAAGTGATTCTGATCGTCCTAGACATCATGGGGTTGAGGCTGCCTATTCTTTTGTTGGAATGCATTGCATCTTTGATCAGTGCAAAGCTTCTGTTACTGTGTTGAAGTTTGGGCACATGAGTTCTGATCTACTTGCTTATGGGGCATCAGATGGAACCTTGACTGTGTGCAGTGTATCTGAGAATCCTTCAGTCATCAAACAATTAAATGGGCATTCCAAAGATGTAACAGATTTTGACTTTACATCAAACAATCAGTACATTGCATCGTCTTCATTGGATAAAACTGTGAGAGTATGGGAGATAGGGAAAGGTATTTGCATACGGGTGATATATGGAGTCTCTTCACAATTGTGTATCCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGCACTGGAAGGGTAATTAATAAATCAATATTTGACAGTGAAGTTACCTCTATGGACCATGATCATACTGGAAATCTTTTATTTTGTGGAGATGCACAGGGATGTATTTACTCAGTAAATATGAACTCCCACACAGGTGTACTATCTCGCTCTCATCGTTACCGAAGTAGCAGCAGACACAAATCTCCTGTCACAACTGTGCAGTACCGGAGTTTCTCTCTTCTGGCTCGAGGACCTGTGTTGTTGACATGTACTCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTTGGAGATAAAAGGTTATTTAACTCTTCGATGCTCACTCAAATTAGCTCCACGTATACACAAAATTCAAGCTTCTTTCTGTCCTCTTCTTTCCCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGTGAGGACTCAAATGTCTATTTCTATGATTTAACGAAGCCAAAGAATACATGTGTGAACAAGCTACAGGGTCACCGGTTTCCTGTGATGGATATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTACGGCGTAGTAATTGTGTGGAAGAGAGAAAGATCACATCAAAAGAGAAATACATAA 1545 0.4375 MDEQNSAAVNDGEPEPQQNHHQQNHTDNNNNKSNDTENNNNDNEKSTSDPELFCCLLQPATTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVAYRNYISRPRNWERDSLRTPSLQSTPGNSGRWFPSPTPHGTRWSEVDSLSCGRDLQNANPVYNHRTSFGSSISDSDRPRHHGVEAAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIGKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSIFDSEVTSMDHDHTGNLLFCGDAQGCIYSVNMNSHTGVLSRSHRYRSSSRHKSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKNTCVNKLQGHRFPVMDIAWNHGENLLASSDFYGVVIVWKRERSHQKRNT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2323 514 Pfam WD domain, G-beta repeat 235 269 IPR001680 GO:0005515
Gso11g2323 514 Pfam WD domain, G-beta repeat 467 504 IPR001680 GO:0005515
Gso11g2323 514 Gene3D - 428 514 IPR015943 GO:0005515
Gso11g2323 514 MobiDBLite consensus disorder prediction 1 37 - -
Gso11g2323 514 MobiDBLite consensus disorder prediction 1 48 - -
Gso11g2323 514 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 238 271 - -
Gso11g2323 514 SMART WD40_4 315 353 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 363 407 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 424 460 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 273 312 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 465 504 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 187 227 IPR001680 GO:0005515
Gso11g2323 514 SMART WD40_4 231 270 IPR001680 GO:0005515
Gso11g2323 514 ProSiteProfiles Trp-Asp (WD) repeats profile. 238 279 IPR001680 GO:0005515
Gso11g2323 514 SUPERFAMILY WD40 repeat-like 193 505 IPR036322 GO:0005515
Gso11g2323 514 ProSiteProfiles Trp-Asp (WD) repeats profile. 472 513 IPR001680 GO:0005515
Gso11g2323 514 ProSitePatterns Trp-Asp (WD) repeats signature. 257 271 IPR019775 -
Gso11g2323 514 Gene3D - 285 426 IPR015943 GO:0005515
Gso11g2323 514 PANTHER WD REPEAT-CONTAINING PROTEIN 13 27 507 - -
Gso11g2323 514 PANTHER WD REPEAT PROTEIN 26-RELATED 27 507 - -
Gso11g2323 514 MobiDBLite consensus disorder prediction 114 135 - -
Gso11g2323 514 MobiDBLite consensus disorder prediction 114 133 - -
Gso11g2323 514 Gene3D - 189 284 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2323 Gso-Chr11 39170478 39177613 Dispersed/Wgd