Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2312 ATGGCAATGATTACACGTTATTGCTCTCTTGCTCTGGTTTTATTGTGGTGTTTATACAACATCTCATTCTTGAAGGCCAATGATGGTGGCTTTAGTGTGGAAATGATCCACCGCGACTCGTCAAGATCACCATTGTATCGTCCAACAGAAACTCCGTTCCAACGAGTTGCGAATGCTGTGCGTCGTTCGATCAACCGTGGGAATCATTTCAAGAAAGCTTTTGTGAGCACAGATTCAGCCGAATCGACTGTAGTAGCAAGTCAAGGTGAATACCTAATGAGATATTCAGTTGGAAGCCCACCATTCCAAGTATTGGGTATTGTTGACACAGGTAGTGACATTCTTTGGCTGCAATGTGAACCCTGTGAAGACTGTTACAAGCAAACCACTCCAATATTCGATCCTTCAAAATCGAAAACCTACAAAACCCTACCTTGCTCTTCTAATACGTGTGAATCTTTGCGTAATACCGCTTGCTCTTCGGACAATGTGTGTGAATATAGTATTGACTATGGTGATGGTTCACACTCAGATGGAGATCTTAGCGTGGAAACCCTAACTTTAGGGTCCACTGACGGTTCTTCTGTCCATTTTCCTAAAACCGTGATAGGATGCGGGCACAACAATGGGGGGACCTTTCAAGAGGAAGGCTCTGGCATAGTTGGCCTTGGAGGAGGACCCGTGTCTCTTATATCTCAATTGAGTTCTTCAATTGGTGGAAAATTTTCCTATTGTTTGGCACCAATATTTTCAGAATCTAACTCATCTAGCAAACTCAATTTTGGAGATGCTGCTGTGGTTTCTGGGCGTGGAACTGTCTCAACCCCTCTAGACCCATTAAATGGACAAGTATTTTATTTCCTAACCTTGGAAGCATTCAGTGTGGGAGACAATAGAATAGAGTTTTCAGGCTCCTCCTCTTCTGGATCTGGTAGTGGAGATGGAAACATTATAATTGACTCTGGTACAACACTCACGCTTTTGCCACAGGAAGATTACTTGAATTTGGAATCAGCAGTATCAGATGTAATTAAATTAGAGCGTGCTAGGGATCCAAGTAAACTCTTGAGCCTATGCTACAAAACTACATCAGATGAACTGGATTTACCAGTCATCACAGCACATTTTAAAGGTGCAGATGTTGAGTTGAATCCTATCAGCACCTTTGTTCCGGTGGAAAAGGGAGTAGTATGTTTTGCTTTCATTTCAAGTAAAATTGGTGCCATCTTTGGGAACTTGGCACAACAAAACCTCTTGGTTGGCTATGACCTCGTAAAGAAAACTGTCTCCTTTAAGCCCACAGATTGTACCAAGGGGTGA 1320 0.4265 MAMITRYCSLALVLLWCLYNISFLKANDGGFSVEMIHRDSSRSPLYRPTETPFQRVANAVRRSINRGNHFKKAFVSTDSAESTVVASQGEYLMRYSVGSPPFQVLGIVDTGSDILWLQCEPCEDCYKQTTPIFDPSKSKTYKTLPCSSNTCESLRNTACSSDNVCEYSIDYGDGSHSDGDLSVETLTLGSTDGSSVHFPKTVIGCGHNNGGTFQEEGSGIVGLGGGPVSLISQLSSSIGGKFSYCLAPIFSESNSSSKLNFGDAAVVSGRGTVSTPLDPLNGQVFYFLTLEAFSVGDNRIEFSGSSSSGSGSGDGNIIIDSGTTLTLLPQEDYLNLESAVSDVIKLERARDPSKLLSLCYKTTSDELDLPVITAHFKGADVELNPISTFVPVEKGVVCFAFISSKIGAIFGNLAQQNLLVGYDLVKKTVSFKPTDCTKG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2312 439 Pfam Xylanase inhibitor N-terminal 91 263 IPR032861 -
Gso11g2312 439 Gene3D Acid Proteases 71 261 IPR021109 -
Gso11g2312 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 317 328 IPR001969 GO:0004190|GO:0006508
Gso11g2312 439 Pfam Xylanase inhibitor C-terminal 286 432 IPR032799 -
Gso11g2312 439 ProSiteProfiles Peptidase family A1 domain profile. 91 432 IPR033121 -
Gso11g2312 439 SUPERFAMILY Acid proteases 83 436 IPR021109 -
Gso11g2312 439 CDD pepsin_A_like_plant 90 436 IPR034161 -
Gso11g2312 439 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 8 437 - -
Gso11g2312 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 106 117 IPR001969 GO:0004190|GO:0006508
Gso11g2312 439 PANTHER OS07G0603500 PROTEIN-RELATED 8 437 - -
Gso11g2312 439 Gene3D Acid Proteases 262 439 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2312 Gso-Chr11 39058978 39060362 Dispersed/Tandem