Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2308 ATGGCTTCATTGAAACTGCCAGAGGTTGTCCCTTCTCCTACACAAGACAGTGAACGACTCAGAAAGGCTTTCCAAGGATATGGGACAGATGAGAAAGCGGTGATATTGGTATTGGGACACAGGAATGCTCAACAAAGGAAGGAAATCAGAGAAACTTATCAGCAGCTTTACAATGAATCGCTCATCGATCGTCTGAATTCTGAATTGTCTGGTGATTTTAGAAATGCTGTTATTCTCTGGAGTTATGATCCTCCAGAAAGGCATGCAGGACTAGCAAAGGATGCATTGAAGGCTAAGAAGAAGGGGACTAAACACCTTCAGGTTCTGGTTGAAATAGCATGTGCATCAACTCCTAACCATTTGGTGGCTGTGAGGCAGGCTTACTGCTCTCTCTTTGATTGCTCTCTTGAGGAGGATATCATAGCCTCTGTTGCTCCACCCCTCAGAAAGCTTTTAGTGAGCCTAGTAAGCTCATTCAGGTATGATAAAGTGGCTGTAAATTTAGAGGTAGCCAAGGAAGAGGCATCAAAACTACATGAAGCTATCAACTGCAAGCAATTAGAGGATGATCATATTATTTGGATACTTAGCACCAGGAATTTTTTCCAGCTCCGGGAAACTTTTGCATGCTACAATAACCTCTATGGGAATACGTTGGAACAGGACATAAAATGTGGTAATGGTGATTTGGAATCTCTCTTACATATGGTGATATGGTGTATAGACTGTCCTGAGAAACATTTTGCAAAGGTTGTAAGAGATTCTATTGTTGGGTTTGGAACCGATGAAGATTCCCTCAACAGAGCTATTGTAACTCGAGCCGAAATCGACCTGTTGAAAGTCAGATTTGGATATGCTAATGTGTACAAGACCAGTCTTGATGATGATGTTATTGGGGATACCTCAGGGAACTACAGAGATTTTTTGATGACTTTGTTAGGTAAAGGTTCAGAGGGAGAGTGA 963 0.4185 MASLKLPEVVPSPTQDSERLRKAFQGYGTDEKAVILVLGHRNAQQRKEIRETYQQLYNESLIDRLNSELSGDFRNAVILWSYDPPERHAGLAKDALKAKKKGTKHLQVLVEIACASTPNHLVAVRQAYCSLFDCSLEEDIIASVAPPLRKLLVSLVSSFRYDKVAVNLEVAKEEASKLHEAINCKQLEDDHIIWILSTRNFFQLRETFACYNNLYGNTLEQDIKCGNGDLESLLHMVIWCIDCPEKHFAKVVRDSIVGFGTDEDSLNRAIVTRAEIDLLKVRFGYANVYKTSLDDDVIGDTSGNYRDFLMTLLGKGSEGE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2308 320 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 ProSiteProfiles Annexin repeat profile. 243 314 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 PRINTS Plant annexin signature 122 136 IPR009118 -
Gso11g2308 320 PRINTS Plant annexin signature 164 184 IPR009118 -
Gso11g2308 320 PRINTS Plant annexin signature 228 246 IPR009118 -
Gso11g2308 320 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Gso11g2308 320 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Gso11g2308 320 PRINTS Annexin family signature 256 276 IPR001464 GO:0005509|GO:0005544
Gso11g2308 320 PRINTS Annexin family signature 300 313 IPR001464 GO:0005509|GO:0005544
Gso11g2308 320 Gene3D Annexin 244 316 IPR037104 GO:0005509|GO:0005544
Gso11g2308 320 Pfam Annexin 248 312 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 Pfam Annexin 174 236 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 Pfam Annexin 15 78 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 Pfam Annexin 99 155 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 Gene3D Annexin 83 156 IPR037104 GO:0005509|GO:0005544
Gso11g2308 320 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Gso11g2308 320 PANTHER ANNEXIN 7 315 - -
Gso11g2308 320 ProSitePatterns Annexin repeat signature. 260 312 IPR018252 GO:0005509|GO:0005544
Gso11g2308 320 Coils Coil 168 188 - -
Gso11g2308 320 Gene3D Annexin 168 242 IPR037104 GO:0005509|GO:0005544
Gso11g2308 320 PANTHER ANNEXIN D3 7 315 - -
Gso11g2308 320 SUPERFAMILY Annexin 2 315 IPR037104 GO:0005509|GO:0005544
Gso11g2308 320 ProSiteProfiles Annexin repeat profile. 83 157 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 SMART annex3 260 312 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 SMART annex3 102 155 IPR018502 GO:0005509|GO:0005544
Gso11g2308 320 SMART annex3 188 237 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2308 Gso-Chr11 39003276 39007846 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1985 15 44813597 44818016 Gso11g2308 11 39003276 39007846 GST