Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2307 ATGGCTTTCAATCAAGAGTTAGAAGCTGTAACCCAAGCTTTCTCAGGGCATGGAGTGGATGAGAAATCATTGGTAACATTACTGGGAAAATGGGATCCTCTGGAGAGAGAATCTTTCAGGAAGAAGACACCACATTTGTTCAGTGAGGATCATGAACGCCATTTTCAGAGGTGGGATGACCAATATGTTCGTCTTCTCAAGCATGAATTCGTGCGTTTTAAGAATGCTGTGGTGCTTTGGACCATGCACCCTTGGGAAAGAGATGCTCGTTTAGTAAAAGAGGCCCTAAAGAAGGGTCCAAATGAATATGGAGTGCTGATTGAGGTTGCATGCACTAGATCCTCAGAAGAGCTATTGGGAGCTAGGAAGGCTTACCATTCCCTCTTTGACCACTCCATTGAAGAAGATGTTGCCTCTCACATCCATGGTATTGAAAGAAAGCTATTGGTTGCCCTACTGAGTGCCTATAGATACGAAGGAACAAAGGTTAAAGATGACACTGCAAAATCAGAGGCCAAAACCCTTTCCAATGCCATTAAGAATGCTCATAAGAAGCCTCTTAATGAGGATGATGAAGTGATTAGGATATTGGCAACAAGAAGCAAGCTACATATCCAGGCAGTTTGCAAGCACTATAAAGAGATATCTGGCAAGAACCTCGATGAGGATCTTGATGATTTAAGATTTAAAGAGGCTGTGCAATGCCTTTGTACTCCACAAATATATTTCAGTAAGGTTTTGAATGCAGCATTGAAAATTGATGTGGATAAGAACACTAAGAAATCGCTTACTCGTGTCATTGTTACTCGAGCTGACATTGATATGAAGGACATAAAGGCAGACTACCATAACCTATATGGGGTTTCTTTACCCCAGAAAGTTGAAGAGGTTGCAAGAGGTAGTTACAAGGATTTCTTGCTAAACTTGATTGTTAGAGGAGGCTAA 945 0.4148 MAFNQELEAVTQAFSGHGVDEKSLVTLLGKWDPLERESFRKKTPHLFSEDHERHFQRWDDQYVRLLKHEFVRFKNAVVLWTMHPWERDARLVKEALKKGPNEYGVLIEVACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGIERKLLVALLSAYRYEGTKVKDDTAKSEAKTLSNAIKNAHKKPLNEDDEVIRILATRSKLHIQAVCKHYKEISGKNLDEDLDDLRFKEAVQCLCTPQIYFSKVLNAALKIDVDKNTKKSLTRVIVTRADIDMKDIKADYHNLYGVSLPQKVEEVARGSYKDFLLNLIVRGG* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2307 314 Gene3D Annexin 83 150 IPR037104 GO:0005509|GO:0005544
Gso11g2307 314 Gene3D Annexin 242 311 IPR037104 GO:0005509|GO:0005544
Gso11g2307 314 PANTHER ANNEXIN 3 313 - -
Gso11g2307 314 ProSiteProfiles Annexin repeat profile. 166 252 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Gso11g2307 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Gso11g2307 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Gso11g2307 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Gso11g2307 314 Gene3D Annexin 151 241 IPR037104 GO:0005509|GO:0005544
Gso11g2307 314 SMART annex3 254 309 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 SMART annex3 99 152 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 SMART annex3 189 236 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 PANTHER ANNEXIN D4 3 313 - -
Gso11g2307 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 SUPERFAMILY Annexin 5 310 IPR037104 GO:0005509|GO:0005544
Gso11g2307 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 Pfam Annexin 260 309 IPR018502 GO:0005509|GO:0005544
Gso11g2307 314 Pfam Annexin 178 225 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2307 Gso-Chr11 38993989 38997267 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1984 15 44798520 44801708 Gso11g2307 11 38993989 38997267 GST