Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2298 ATGAAAACATCATCACCTTCAACTCTTGCCCTAGTTTTATTCTATCTTTGCAACATCTTTTACTTAGAGGCTTTCAATGGTGGCTTTAGTGTGGAGATGATCCACCGTGACTCATCAAGATCACCATTCTTTAGTCCCACAGAAACTCAATTCCAACGAGTTGCTAATGCCGTGCATCGTTCCATTAACCGTGCCAATCATTTGAACCAATCTTTTGTCTCTCCAAACTCACCTGAGACCACTGTTATATCAGCTCTAGGTGAATACCTCATTAGTTATTCAGTAGGAACCCCATCACTCCAGGTCTTTGGAATTCTTGATACGGGTAGTGACATCATTTGGCTGCAATGCCAACCATGTAAAAAATGCTACGAACAAACCACTCCTATATTTGATTCTTCAAAATCCCAAACATACAAAACCCTACCTTGCCCTTCTAATACATGTCAATCTGTTCAAGGTACCTTTTGCTCCTCTAGGAAACATTGTTTATATAGCATTCATTATGTGGATGGGTCACAGTCACTAGGAGATCTTAGTGTGGAGACCCTCACTTTAGGCTCCACCAATGGCTCTCCTGTCCAATTTCCTGGAACTGTGATAGGATGCGGGCGTTACAATGCTATTGGCATTGAAGAGAAAAATTCCGGCATCGTTGGCCTAGGGCGCGGACCCATGTCCCTTATAACTCAATTGAGTCCTTCAACAGGTGGGAAGTTTTCATATTGTTTGGTACCAGGGCTGTCTACTGCATCCAGCAAACTCAATTTTGGAAATGCTGCCGTGGTTTCCGGGCGTGGGACCGTCTCAACCCCATTATTCTCAAAAAATGGACTAGTATTCTACTTCCTAACCCTAGAAGCATTCAGTGTAGGACGCAATAGAATAGAGTTTGGAAGCCCTGGATCTGGTGGAAAGGGAAATATCATAATTGACTCAGGTACAACGCTCACTGCTTTGCCAAATGGTGTTTACTCAAAGTTGGAAGCAGCAGTAGCAAAGACAGTGATATTGCAGCGTGTTAGGGATCCAAATCAAGTGTTGGGTCTTTGCTACAAAGTTACACCTGATAAACTAGATGCAAGTGTACCAGTGATCACAGCACATTTTAGTGGTGCAGATGTCACTTTAAATGCTATCAACACCTTTGTTCAAGTGGCCGATGATGTAGTGTGCTTTGCTTTCCAGCCAACTGAAACTGGTGCCGTCTTTGGGAACTTGGCTCAGCAAAACCTCTTGGTTGGTTATGATCTCCAAATGAACACCGTGTCCTTTAAGCACACAGATTGCACTAAGCAATGA 1302 0.4324 MKTSSPSTLALVLFYLCNIFYLEAFNGGFSVEMIHRDSSRSPFFSPTETQFQRVANAVHRSINRANHLNQSFVSPNSPETTVISALGEYLISYSVGTPSLQVFGILDTGSDIIWLQCQPCKKCYEQTTPIFDSSKSQTYKTLPCPSNTCQSVQGTFCSSRKHCLYSIHYVDGSQSLGDLSVETLTLGSTNGSPVQFPGTVIGCGRYNAIGIEEKNSGIVGLGRGPMSLITQLSPSTGGKFSYCLVPGLSTASSKLNFGNAAVVSGRGTVSTPLFSKNGLVFYFLTLEAFSVGRNRIEFGSPGSGGKGNIIIDSGTTLTALPNGVYSKLEAAVAKTVILQRVRDPNQVLGLCYKVTPDKLDASVPVITAHFSGADVTLNAINTFVQVADDVVCFAFQPTETGAVFGNLAQQNLLVGYDLQMNTVSFKHTDCTKQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2298 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Gso11g2298 433 SUPERFAMILY Acid proteases 84 430 IPR021109 -
Gso11g2298 433 Gene3D Acid Proteases 63 257 IPR021109 -
Gso11g2298 433 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 11 431 - -
Gso11g2298 433 ProSiteProfiles Peptidase family A1 domain profile. 89 426 IPR033121 -
Gso11g2298 433 Pfam Xylanase inhibitor C-terminal 282 426 IPR032799 -
Gso11g2298 433 Gene3D Acid Proteases 258 433 IPR021109 -
Gso11g2298 433 CDD pepsin_A_like_plant 88 430 IPR034161 -
Gso11g2298 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 309 320 IPR001969 GO:0004190|GO:0006508
Gso11g2298 433 PANTHER OS07G0603500 PROTEIN-RELATED 11 431 - -
Gso11g2298 433 Pfam Xylanase inhibitor N-terminal 89 259 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2298 Gso-Chr11 38890112 38891523 Tandem