Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2290 ATGATGTACAATGATCCTCAGCAGCAGCAGCAGCAGCACCAGTACCAGCAACAACAGCAGCAGCAGCATTTCCACCACCAGCCGCCGGGTCCGGAGTTCCACCGCGGACCGCTGCCGCCGTCGCTTCCTCCGCCGGTGATGCGGCAAGGCTCCGCCTCGTCGACGAACCTCGCCCCTGAATTTCATCATCCCGGCCCCGGAGGACCCCCGCCTCCCCATTACGACGCTCACAGTGATATTCATGGTGCAAAAAGAATACGGAAGCTTACTCAAAGGAAAGCGGTTGATTATACAAGCACAGTTGTGCGTTATATGCAGATTCGTATGTCGCAGCGGGATTCAAGGGATAGGACAGTACTGCAACCCACGTCGGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCAATTAATCGTGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACCGGTTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCACATGATCAAGCAATCAGATCCATGGTCTGGAGTCATAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGCTCGTGCTCTGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGTTCATTAACCGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCTCTATTAGTATCAGGTGGGAAGGACAATCTAGTGAAGCTTTGGGATGCTAAAACAGGGAGAGAGCTTTGTTCATTTCATGGCCACAAAAACACTGTGCTGTGTGTCAAATGGAATCAAAATGGCAACTGGGTGCTAACAGCTTCAAAGGATCAAATAATAAAGCTTTATGACATAAGAGCAATGAAGGAACTTGAATCGTTCCGTGGGCATCGCAAGGATGTTACTACTTTGGCATGGCATCCATTCCATGAAGAGTACTTTGTCAGTGGGAGTTACGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCACAAATTGAAATTTCCAATGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATTGGCTACCTTCTGTGCAGTGGCAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACCCTGCTCGTGATAGATTTAACACTGGCATGCAAGGTGGTAATTTTCCAATAGCTGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTGACTCGAAATGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAGCCCCATCCTGTTTCAATGGGTGCTCCTCCTCTTCCCCCAGGTCCACATCCCTCCCTAATTAATGCCAACCAACAGCAACCATACCAACAGAATCCTCAGCAGATGCCACAACATCAACACCAGGCTCTACCACAGCAGATGGGTTCTTTGCCTATGCCTCCAAATATGCAACAACTACAGCACCCTTCCCATTCACCCTTCCCAAATATGCCTCGCCCTCCACCCCAAATGCCTATTGGCATGCCAGGATCTATACCAGGGATTTCATCAGTGCCTACATCACATCCAATGCCAATGCCAGGTCCAATGGGGATGCAAGGGGCGATGAATCAGATGGGTTCTCCAATGCCACAAGGTCCTTATGTAGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCACCTCTTGGTGGTTTTCCAGGAAACTTGCCTAATATGCAAGGGCCATCAAATGCTAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAGGGTGGCCAAATGCCTCTGATGCAAGGGTATAATCCTTACCAGTCTGGTAATCAATCTGGGATGCCTCCAAACGCACAACCATAG 2106 0.4758 MMYNDPQQQQQQHQYQQQQQQQHFHHQPPGPEFHRGPLPPSLPPPVMRQGSASSTNLAPEFHHPGPGGPPPPHYDAHSDIHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVLQPTSAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMQGGNFPIAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLINANQQQPYQQNPQQMPQHQHQALPQQMGSLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMPGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGSPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNAQP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2290 701 PRINTS G protein beta WD-40 repeat signature 256 270 IPR020472 -
Gso11g2290 701 PRINTS G protein beta WD-40 repeat signature 298 312 IPR020472 -
Gso11g2290 701 PRINTS G protein beta WD-40 repeat signature 426 440 IPR020472 -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 363 395 - -
Gso11g2290 701 MobiDBLite consensus disorder prediction 32 46 - -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 407 438 - -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 227 IPR001680 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 153 185 IPR001680 GO:0005515
Gso11g2290 701 MobiDBLite consensus disorder prediction 1 26 - -
Gso11g2290 701 MobiDBLite consensus disorder prediction 632 701 - -
Gso11g2290 701 MobiDBLite consensus disorder prediction 495 570 - -
Gso11g2290 701 MobiDBLite consensus disorder prediction 524 570 - -
Gso11g2290 701 Gene3D - 312 444 IPR015943 GO:0005515
Gso11g2290 701 SMART WD40_4 272 311 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 399 439 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 141 185 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 188 227 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 230 269 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 314 353 IPR001680 GO:0005515
Gso11g2290 701 SMART WD40_4 356 396 IPR001680 GO:0005515
Gso11g2290 701 CDD WD40 157 438 - -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 316 - -
Gso11g2290 701 PANTHER WD40 REPEAT PROTEIN 69 697 IPR045245 GO:0031124
Gso11g2290 701 MobiDBLite consensus disorder prediction 654 701 - -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 320 IPR001680 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 362 IPR001680 GO:0005515
Gso11g2290 701 Gene3D - 97 311 IPR015943 GO:0005515
Gso11g2290 701 MobiDBLite consensus disorder prediction 1 78 - -
Gso11g2290 701 ProSitePatterns Trp-Asp (WD) repeats signature. 298 312 IPR019775 -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 355 - -
Gso11g2290 701 SUPERFAMILY WD40 repeat-like 149 438 IPR036322 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 407 438 IPR001680 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 227 - -
Gso11g2290 701 Pfam WD domain, G-beta repeat 359 395 IPR001680 GO:0005515
Gso11g2290 701 Pfam WD domain, G-beta repeat 316 353 IPR001680 GO:0005515
Gso11g2290 701 Pfam WD domain, G-beta repeat 238 269 IPR001680 GO:0005515
Gso11g2290 701 Pfam WD domain, G-beta repeat 409 438 IPR001680 GO:0005515
Gso11g2290 701 Pfam WD domain, G-beta repeat 277 311 IPR001680 GO:0005515
Gso11g2290 701 Pfam WD domain, G-beta repeat 193 226 IPR001680 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 269 IPR001680 GO:0005515
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 237 269 - -
Gso11g2290 701 ProSiteProfiles Trp-Asp (WD) repeats profile. 363 395 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2290 Gso-Chr11 38810289 38823526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1973 15 44372488 44393430 Gso11g2290 11 38810289 38823526 GST