Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2272 ATGGGAGTTGATGATGAACAAGAGATGGAGGAGGAGGAGGAGGAGGAGAGAGAAGAAGAGAAAAAGAAGCATAAGCAGGCTCGTCCTTCTCTCTTCCCTATTAGTGTGAGAAAGGGGTTTAGTGGTGAAAGAGTGAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCAACCCTACTTGAGGCCTATGAGGCCAAATGGGTGCTAAGAAACAGAGCCAAGCTCAAGGGCCATGACTGGGAGGACGTGGCGCGGCACGTGTCGTCACGTGCCAACTGCACCAAGTCACCAAAGACTTCAACGCAGTGTAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAATCAGCAACAGCAGATCATGCATCATCATCTTGGCCTCTTTATTCACGGCTTGATCTTCTTCTTAGGGGAACTGGGCCCGTCTTCTCGTCGCCGCCGGGGCCGCTGATGGTGGCTGCGCCCATGCCGCCTCTGTCGCCGGTGGAGCCGTCGCAACCGCTGGCTCCTTCAGGGCCACTTGCTAATGCACAAAACTCGCATGGATCCAATGGGGTTGATGAGAAGCTTGCTAAGGAAGATGGGTTAGGAACTAAGTCATCTGATCAAGTATCTAGCAAGAATCCATTGGACACAGATAGCAGCACGCCAGCACTTTATAGCCAGAAGGAGGAGTTAAGAAGCAACAAGAGGAAGAAGAAAACAATTGATCACAACACAGGACGAAGAAGGAAAGAATATGTGGAGATAGCAGAAAGTTTAAGATGGCTAGCTGAAGCTATGATAAGGTCAGAACAAGCAAGAATGGACACAATGAAGGAGATAGAGAGGATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTCAAGAGAACTGAAATTATTGCCAATACACAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAGTAAAGGTGTTGATTCATCTCTAAGAATTGGAAGAAGTTAA 981 0.4822 MGVDDEQEMEEEEEEEREEEKKKHKQARPSLFPISVRKGFSGERVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESATADHASSSWPLYSRLDLLLRGTGPVFSSPPGPLMVAAPMPPLSPVEPSQPLAPSGPLANAQNSHGSNGVDEKLAKEDGLGTKSSDQVSSKNPLDTDSSTPALYSQKEELRSNKRKKKTIDHNTGRRRKEYVEIAESLRWLAEAMIRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNSKGVDSSLRIGRS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2272 326 Coils Coil 2 28 - -
Gso11g2272 326 MobiDBLite consensus disorder prediction 155 169 - -
Gso11g2272 326 MobiDBLite consensus disorder prediction 1 31 - -
Gso11g2272 326 Gene3D - 50 115 - -
Gso11g2272 326 MobiDBLite consensus disorder prediction 1 16 - -
Gso11g2272 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 322 IPR044823 -
Gso11g2272 326 MobiDBLite consensus disorder prediction 172 186 - -
Gso11g2272 326 MobiDBLite consensus disorder prediction 155 241 - -
Gso11g2272 326 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 18 322 - -
Gso11g2272 326 MobiDBLite consensus disorder prediction 199 224 - -
Gso11g2272 326 Pfam Myb/SANT-like DNA-binding domain 47 135 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2272 Gso-Chr11 38547650 38551554 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso11g2272 Myb_DNA-bind_4 6.5e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1956 15 43822465 43825579 Gso11g2272 11 38547650 38551554 GST