Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2271 ATGAAAACTGCAGTGATGATATTGAGAAACCTGGAGGCACTTGAGCATATTATTAAAGCAGGATGGAGGATTTCTAAGTTCTTCTGTTTTGTACACGTTACCCAAACCTATCTGATCGCCCCTGCTGTGATCTATGGTCCTAGCATGCTTCCTACAATCGATTTGAAAACAGCTGTGTTCTTAATGGAAAAGATCTCACCCTGGTTTGGTAAAGTTGCTTGTGGAGATATTGTAGTCTTGCGCAATCCTCAAGACCCTAGGCGCTTCATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGCATTACATACATTTCCAATCCTGAGACCTATGAATTGGAGGGTGATAGTTTTACACACATTTCCTCTCTTGATAACAGTGATAAGTCTAAGACTATTTTGGTTCCAAAGGGGGCCGTTTGGGTAGAGGGAGATAATAAGTATAACAGCAATTATTCAAGAAAATTTGGTCCTGTTCCTTATGACCTTATTGATGGCAAGATGTTCTGGAGGATAACACCACTTAAAAAATTTGGACCTTTCTGGAATAAATGA 555 0.4036 MKTAVMILRNLEALEHIIKAGWRISKFFCFVHVTQTYLIAPAVIYGPSMLPTIDLKTAVFLMEKISPWFGKVACGDIVVLRNPQDPRRFMTKRVVGLEGDSITYISNPETYELEGDSFTHISSLDNSDKSKTILVPKGAVWVEGDNKYNSNYSRKFGPVPYDLIDGKMFWRITPLKKFGPFWNK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2271 184 SUPERFAMILY LexA/Signal peptidase 36 182 IPR036286 -
Gso11g2271 184 CDD S26_SPase_I 41 167 IPR019533 GO:0004252|GO:0006465
Gso11g2271 184 ProSitePatterns Signal peptidases I signature 3. 140 153 IPR019758 GO:0004252|GO:0016021
Gso11g2271 184 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gso11g2271 184 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gso11g2271 184 PRINTS Bacterial leader peptidase 1 (S26A) family signature 135 154 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gso11g2271 184 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 6 183 - -
Gso11g2271 184 Gene3D Umud Fragment, subunit A 34 183 - -
Gso11g2271 184 Pfam Signal peptidase, peptidase S26 27 171 IPR019533 GO:0004252|GO:0006465
Gso11g2271 184 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 6 183 - -
Gso11g2271 184 TIGRFAM sigpep_I_bact: signal peptidase I 27 175 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2271 Gso-Chr11 38543338 38545487 Dispersed/Transposed