Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2255 ATGGGGAGTAGAACTACCTGGAGGGTTGTTGGTGTTGAAGATGACAAGGGAGCTGAAAGAGGAATGCCGAGCTTCAATTCTGAGTTACCCAATTCCAATTCATGCTATACAGAGGGGAACACAATTGATTCTTTTCGTGTTTCTGACTTTGGAGCATTTGATCAGTCATATCACATAGAGGATGCTGTTGACCTCAGTGGAAACCCAGTTTACAATTCACTAAAGGTAAATAGCCAAACAATTTCTCCGGGTTCTGTTCACATTAGTAGCCTTGGTCAGTTGCCAATTTCACTCGAAAAAAGCCCATTGACAAATCAAACAGAGCCACCGCATAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGGCACAATATTAGTTGGTAATACAGATAACTGGGAGGAGTCTACCATGGCTGATGCCAGTCCCAGGACTGATATTTCTACAGATGGTGACACTGATGACAAGAATCATCCGTTTGATAGAAATCAAGCCCTTACTGCTGTTTCCGACTCTAGTGACAGATCGAAAGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAACCGTGAAGCTGCCAGAAAAAGCCGCTTGCGAAAGAAAGCGTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATTTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCTAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAACTCTCATGCAAGTGACACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTGCTGTCTGGCATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTTCTCAAGCTGCTGGTAAGTCAATTGGAGCCTCTCACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAATCCTCTCAACAAGCAGAAGATGCGTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACTTTGTCCACCGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAGTTACATGGGTCAAATGGCCATGGCCATGGGCAAGCTAGGGACACTAGAAGGGTTCATTCAACAGGCTGACAATCTTCGCCAGCAAACTCTTCAACAAATGCACCGTATACTGACAACTCGCCAATCAGCTCGCGCACTCCTTGCTATACATGACTACATTTCGCGTCTGCGTGCTCTCAGTTCGCTTTGGCTTGCTCGCCCTAGAGATTGA 1410 0.4596 MGSRTTWRVVGVEDDKGAERGMPSFNSELPNSNSCYTEGNTIDSFRVSDFGAFDQSYHIEDAVDLSGNPVYNSLKVNSQTISPGSVHISSLGQLPISLEKSPLTNQTEPPHRLRLQKVQSSNPGTILVGNTDNWEESTMADASPRTDISTDGDTDDKNHPFDRNQALTAVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVASYMGQMAMAMGKLGTLEGFIQQADNLRQQTLQQMHRILTTRQSARALLAIHDYISRLRALSSLWLARPRD* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2255 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Gso11g2255 469 Pfam Basic region leucine zipper 180 226 IPR004827 GO:0003700|GO:0006355
Gso11g2255 469 PANTHER TRANSCRIPTION FACTOR TGA9 61 469 - -
Gso11g2255 469 MobiDBLite consensus disorder prediction 148 162 - -
Gso11g2255 469 Coils Coil 260 280 - -
Gso11g2255 469 Pfam Seed dormancy control 266 342 IPR025422 GO:0006351|GO:0043565
Gso11g2255 469 MobiDBLite consensus disorder prediction 115 186 - -
Gso11g2255 469 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 61 469 - -
Gso11g2255 469 ProSiteProfiles DOG1 domain profile. 249 466 IPR025422 GO:0006351|GO:0043565
Gso11g2255 469 Coils Coil 203 230 - -
Gso11g2255 469 CDD bZIP_HBP1b-like 184 236 - -
Gso11g2255 469 SMART brlzneu 180 243 IPR004827 GO:0003700|GO:0006355
Gso11g2255 469 Gene3D - 183 234 - -
Gso11g2255 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Gso11g2255 469 MobiDBLite consensus disorder prediction 115 147 - -
Gso11g2255 469 SUPERFAMILY Leucine zipper domain 184 227 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2255 Gso-Chr11 38322125 38335674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g2255 DOG1 5.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1945 15 43564390 43573236 Gso11g2255 11 38322125 38335674 GST