Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2236 ATGGCGTTAGAATTCGTTGGTGGTGCTGTTCTCTCTTCTTTCCTTCAGGTTACATTTGACAGGCTGGGTTCTCATCAAGTTCTGGACTTCTTTCGTGGAAGAAAACTCGATGAGACGCTACTGAGCAAGTTGAAGGTGAAGTTACTGTCCATAGATGCTCTAGCTGATGATGCAGAACAAAAGCAGTTCAGAGATTCACGTGTGAAAGCATGGCTTGTTGCTGTCAAAGATGCGGTGCATGAGGCAGAGGATGTCTTGGATGAAATAGAATATGAACACTCCAAATGCCAAGTTGAAGCTGAACCTGAATCTCAAACCTGTACTTGCAAGGTACCAAATTTCTTCAAATCTTCTCCTCTTAGTTCCTTTAACAAGGAAGTTAAATCAAGGATGGAACAACTCATTGGCAGCCTAGAATTTCTCTCGAGCCAAAAGGGTGATCTAGGTTTGAACAATGCTAGTGGTGTTGGATCTGGATTCGGTAGTGAAGTGTCACAGAAATCACCATCAACATCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATAATGACAAGGAAATGATAATTAATTGGCTCACTTCTGACTCTGGCAACCACAGTAAGTTATCAATACTTTCTATTGTGGGTATGGGCGGAATGGGTAAAACCACACTTGCCCAACATGCATACAATGACCCAAGGATAGATGATGTATTTGACATCAAAGCTTGGGTCTGTGTTTCAGATGATTTTACTGTTTTCAAGGTAACAAGAACAATTCTTGAGGCAATCACTAAGTCAACTGATGATAGTAGAAACCTACAGATGGTTCATGAAAGATTGCTAGTAGAGTTGAAAGATAAAAAGTTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAAACTGGACGAATGGGTAGCTGTGCAGACTCCTCTATATTTTGGGGCTGAGGGAAGTAGAATCATTGTCACAACACGCAATAAGAAAGTTGCTTCTAGCATGAGGTCAAAAGAACACTACCTGCAGCAATTACAAGAAGATTATTGTTGGCAGTTGTTTGCAGAACACGCATTCCAAAATGCTAATCCTCAATCAAATCCAGACTTCATGAAGATTGGTATGAAGATAGTTGAAAAATGTAAAGGACTTCCTCTAGCCTTGAAAACAATGGGAAGTCTATTACACACCAAATCTATTTTGGAATGGAAAGGCATATTGGAAAGTGAGGTATGGGAATTAGATAATAGTGATATTGTCCCTGCTTTAGCACTTAGCTATCACCACATTCCTTCCCATCTCAAAAGATGTTTTGCTTATTGTGCATTATTTCCCAAAGGTTATTTGTTTGACAAGGAGTGTTTAATTCAGTTCTGGATGGCTCAAAAATTGCTACAATGCCATCAACAGAGTAAGAGTCCAGAAGAAATTGGTGAACAGTACTTCAATGATCTATTATCGAGGTCCTTCTTCCAAGAATCAAGCAACATAGAGGGGGGAAGGTGTTTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTAGCGAGGACATGTGTTTCAGGCTGGAAGTTGATCAAGCAAAAACCATACCAAAAGCAACCCGTCATTTTTCAGTTGTGGTCAATGATTATCGATATTTTGAAGGTTTTGGAACTTTATATGATACAAAAAGGTTGCATACGTTTATGTCAACAACTGACTGCAGAGATTCTCATGAATATTATTGGAGGTGCAGGATGTCAATACATGAGTTGATCTCCAAGTTTAAGTTCTTACGCTTCTTATCTTTGTCTTATTGGCATAGACTCACAGAGGTGCCTGACTCTATTGGCAATCTTAAACATCTTCGTTCTTTAGACCTTTCCCATACTAGCATAAGAAAACTACCAGAGTCAACTTGTTCACTCTACAACTTGCAAATACTGAAACTGAATGATTGTAAATATTTGAAGGAGCTGCCCTCAAATTTACATAAACTCACCTATTTGCGATACCTTGAATTTATGAATACTGGAGTGAGAAAGCTGCCAGCACATTTGGGAAAACAGAAGAACCTTCTAGTATTGATAAATTCGTTTGATGTTGGGAAAAGTAGGGAGTTCACTATTCAGCAGTTAGGAGAACTCAATCTTCATGGAAGGCTATCAATTGGTAGGCTGCAGAATGTTGAGAATCCATCGGATGCCTCAGCTGTGGATTTGAAAAATAAAACACACCTTATGCAGCTAGAATTAAAATGGGATTACAATGGGAACCTTGATGATTCTTCCAAAGAAAGGGATGAAATTGTAATTGAGAATCTAGAGCCTTCCAAACACTTGGAGAGGTTGTCAATCAGGAACTATGGTGGTAAACATTTTCCAAATTGGTTACTACATAATTCTTTATTGAATGTGGTGTCCTTAGTGTTGGACAGATGTCAATCTTGCCAACGTTTGCCTCCCCTTGGACTCTTGCCATTGCTCAAGAACCTGGAGATTTCAGGCCTTGATGGGATAGTGAGTACTGGTGCTGATTTTCATGGGAATAGCTCTTCTTCATTTACATCCTTGGAAAAATTGAAATTCTACAATATGAGAGAATGGGAAAAATGGGAATGCCAAAATGTGGCAAGTGCTTTTCCAAGTCTTCAACATCTTTCCATAAAGGAATGTCCTAAGCTGAAAGGGAACCTGCCACTGTCCGTGCCGCTTGTTCATTTAAGGACACTAACAATTCAGGACTGCAAAAATCTTCTAGGCAATGATGGATGGTTGGAATTTGGTGGGGAACAATTCACCATCAGGGGACAGAACATGGAAGCAACGTTGCTGGAAACGAGTGGGCACATCATATCTGACACTTGTCTTAAAAAGTTGTATGTTTATTCTTGTCCAGAAATGAATATTCCCATGAGCCGTTGCTACGATTTCCTTGAATCGTTGACCATCTGTGATGGCTGCAACTCTCTAATGAGCTTTTCGCTAGATTTATTCCCAACACTTCGGAGACTTCGTCTTTGGGAGTGTCGTAATCTACAGAGGATTTCACAGAAGCACGCTCATAATCATGTGATGTATATGACAATCAATGAGTGTCCTCAATTAGAATTATTGCATATCCTCCTTCCATCTCTGGAGGAGCTACTCATAAAAGATTGTCCAAAAGTTCTGCCTTTCCCTGACGTAGGTTTGCCATCAAATCTAAACAGGTTGACTCTCTATAATTGCTCCAAATTTATAACCTCACCAGAAATAGCTTTGGGAGCCCATCCCTCTCTAAAAACCTTGGATATTGGAAAACTGGACCTGGAGTCATTTCATGCTCAAGATTTGTTGCCACATTCTCTTCGTTATCTATGCATCTATGACTGCCCCAGCCTCCAATACTTACCAGAGGGTCTCTGCCACCACTCCTCTCTCAGGGAACTGTTTCTTCTGAGCTGCCCCAGGCTCCAATGCTTGCCAGATGAGGATCTGCCCAAGTCCATTTCAACTCTGGTAATTCGGTATTGTCCCTTGCTCCAACCGCGTTGCCAGAGACCAGAAGGCGAAGACTGCGGAAAGATTGCTCATATTGAAAATCTCTTTATTATTGACTGA 3567 0.4031 MALEFVGGAVLSSFLQVTFDRLGSHQVLDFFRGRKLDETLLSKLKVKLLSIDALADDAEQKQFRDSRVKAWLVAVKDAVHEAEDVLDEIEYEHSKCQVEAEPESQTCTCKVPNFFKSSPLSSFNKEVKSRMEQLIGSLEFLSSQKGDLGLNNASGVGSGFGSEVSQKSPSTSLVVESVIYGRDNDKEMIINWLTSDSGNHSKLSILSIVGMGGMGKTTLAQHAYNDPRIDDVFDIKAWVCVSDDFTVFKVTRTILEAITKSTDDSRNLQMVHERLLVELKDKKFLLVLDDVWNEKLDEWVAVQTPLYFGAEGSRIIVTTRNKKVASSMRSKEHYLQQLQEDYCWQLFAEHAFQNANPQSNPDFMKIGMKIVEKCKGLPLALKTMGSLLHTKSILEWKGILESEVWELDNSDIVPALALSYHHIPSHLKRCFAYCALFPKGYLFDKECLIQFWMAQKLLQCHQQSKSPEEIGEQYFNDLLSRSFFQESSNIEGGRCFVMHDLLNDLAKYVSEDMCFRLEVDQAKTIPKATRHFSVVVNDYRYFEGFGTLYDTKRLHTFMSTTDCRDSHEYYWRCRMSIHELISKFKFLRFLSLSYWHRLTEVPDSIGNLKHLRSLDLSHTSIRKLPESTCSLYNLQILKLNDCKYLKELPSNLHKLTYLRYLEFMNTGVRKLPAHLGKQKNLLVLINSFDVGKSREFTIQQLGELNLHGRLSIGRLQNVENPSDASAVDLKNKTHLMQLELKWDYNGNLDDSSKERDEIVIENLEPSKHLERLSIRNYGGKHFPNWLLHNSLLNVVSLVLDRCQSCQRLPPLGLLPLLKNLEISGLDGIVSTGADFHGNSSSSFTSLEKLKFYNMREWEKWECQNVASAFPSLQHLSIKECPKLKGNLPLSVPLVHLRTLTIQDCKNLLGNDGWLEFGGEQFTIRGQNMEATLLETSGHIISDTCLKKLYVYSCPEMNIPMSRCYDFLESLTICDGCNSLMSFSLDLFPTLRRLRLWECRNLQRISQKHAHNHVMYMTINECPQLELLHILLPSLEELLIKDCPKVLPFPDVGLPSNLNRLTLYNCSKFITSPEIALGAHPSLKTLDIGKLDLESFHAQDLLPHSLRYLCIYDCPSLQYLPEGLCHHSSLRELFLLSCPRLQCLPDEDLPKSISTLVIRYCPLLQPRCQRPEGEDCGKIAHIENLFIID* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2236 1188 PANTHER DISEASE RESISTANCE PROTEIN RP 23 1029 IPR044974 GO:0006952
Gso11g2236 1188 Pfam Rx N-terminal domain 10 103 IPR041118 -
Gso11g2236 1188 Coils Coil 72 92 - -
Gso11g2236 1188 Gene3D Ribonuclease Inhibitor 889 1048 IPR032675 -
Gso11g2236 1188 Gene3D Ribonuclease Inhibitor 696 888 IPR032675 -
Gso11g2236 1188 Gene3D Ribonuclease Inhibitor 1049 1168 IPR032675 -
Gso11g2236 1188 Gene3D - 34 132 - -
Gso11g2236 1188 ProSiteProfiles Leucine-rich repeat profile. 610 631 IPR001611 GO:0005515
Gso11g2236 1188 PRINTS Disease resistance protein signature 205 220 - -
Gso11g2236 1188 PRINTS Disease resistance protein signature 278 292 - -
Gso11g2236 1188 PRINTS Disease resistance protein signature 374 388 - -
Gso11g2236 1188 PRINTS Disease resistance protein signature 606 622 - -
Gso11g2236 1188 Pfam NB-ARC domain 183 401 IPR002182 GO:0043531
Gso11g2236 1188 Gene3D Ribonuclease Inhibitor 547 688 IPR032675 -
Gso11g2236 1188 SUPERFAMILY L domain-like 943 1171 - -
Gso11g2236 1188 Gene3D - 419 508 IPR036388 -
Gso11g2236 1188 Gene3D - 163 337 IPR027417 -
Gso11g2236 1188 Gene3D - 338 418 IPR042197 -
Gso11g2236 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 434 IPR027417 -
Gso11g2236 1188 SUPERFAMILY L domain-like 497 909 - -
Gso11g2236 1188 PANTHER OS05G0414200 PROTEIN 23 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2236 Gso-Chr11 38073777 38078938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2236 571 684 Receptor kinase-like Gene Family AT3G05660 36.207 5.08e-11 65.5