Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2231 ATGGGGGCTACTGAAGAGGCCTTACAAAATCTTGTAAATGTAAACGTTGTTGATGCAGAAAATCCAAAAAATATTAAAGTTAGTGGTACAGAAGATTCGGTAGTAAATGACAAAGAATTAGGTGCTAAAGAAACCCCTATTAAAGATAAGAAAGATAGTATTCCAGGTGAAGTAAAAGAGATGTTGAAATCATTGGCAAGTGAATGGGAGAATGTAGTTGATATCAATGCATTGCAAGTGATCCCTCTTAAAGGGGCAATGACAAATGAGGTGTTCCAAATAAAATGGCAAACAACAGCAGGAGAATCCTCAAGGAAGGTTTTACTAAGAACCTATGGTGAGGGTACTGGTATTTTCTTTGATAGGGATGTTGAAGTCACAACATTTGAATTCATGTCAAAGAGCGGACAAGGACCTAGTTTGCTAGGAAGGTTTGCTAATGGTCGCATTGAAGAATTCATCAATGCCAGGACATTATCAGCATCTGATTTGCGAGATCCATCTATTTCTGCTCTTATAGCAGCCAAACTGAAGGAGTTTCATGATCTTGATATGCCTGGCCCAAAAACCGTGAACCTTTGGGATAGGTTAAGAAACTGGCTTAGTGAAGCCAAGCGCTTGTGTTCTCCTGAAGAAGCTGAAGCATTTCATTTGGACACAATGGACAAGGAAATATCTGCTTTGGAAATTTTTTTATCAGACACCCACCAACGCATAGGATTTTGCCACAATGATTTGCAATATGGTAACATAATGTTTGATGAAGAATCCAGTTCTGTGACCATAATTGATTATGAATATGCAAATTATAATCCTGTAGCATATGATATAGCAAACCACTTTAATGAGATGGCTGCCAACTATCATACAGATACCCCACATGTGCTTGACTTCACTAAATATCCTGATTTGGAGGAGCGTCGAAGATTTGCACATGCGTATTTGAGTTCTTCGGGTGAACAACCTAGTGACACTGAAGTGGAGCAGTTGCTTGATGACATTGAGAAATATGCACTTGCTAATCATATACTATGGGGCGTGTGGGGAATAATTTCGGAACATGTAAATAAAATTGACTTTGACTACAAGGAGTATGCGAAACAGAGGCTTCAAGAGTACTGGTCAAGGAAAACTTGTCTTTTGGGCTCTCATGAGTACTCTTCCCATGATAATGCGACTAAGGGTAATGGGGAGCAAACACTAACATCAACCACTAACAGAAAGCCAGCTAAGAGGAATAGTGTCTCCAATAAATTGAAGAAAATCTTTGGTCTTGGCTTTTTCAGATCGAAACACTAG 1299 0.3903 MGATEEALQNLVNVNVVDAENPKNIKVSGTEDSVVNDKELGAKETPIKDKKDSIPGEVKEMLKSLASEWENVVDINALQVIPLKGAMTNEVFQIKWQTTAGESSRKVLLRTYGEGTGIFFDRDVEVTTFEFMSKSGQGPSLLGRFANGRIEEFINARTLSASDLRDPSISALIAAKLKEFHDLDMPGPKTVNLWDRLRNWLSEAKRLCSPEEAEAFHLDTMDKEISALEIFLSDTHQRIGFCHNDLQYGNIMFDEESSSVTIIDYEYANYNPVAYDIANHFNEMAANYHTDTPHVLDFTKYPDLEERRRFAHAYLSSSGEQPSDTEVEQLLDDIEKYALANHILWGVWGIISEHVNKIDFDYKEYAKQRLQEYWSRKTCLLGSHEYSSHDNATKGNGEQTLTSTTNRKPAKRNSVSNKLKKIFGLGFFRSKH* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2231 432 CDD ETNK_euk 78 376 - -
Gso11g2231 432 SUPERFAMILY Protein kinase-like (PK-like) 52 377 IPR011009 -
Gso11g2231 432 Gene3D - 113 374 - -
Gso11g2231 432 Gene3D Phosphorylase Kinase; domain 1 65 153 - -
Gso11g2231 432 Pfam Choline/ethanolamine kinase 104 305 - -
Gso11g2231 432 PANTHER CHOLINE/ETHANOALAMINE KINASE 22 412 - -
Gso11g2231 432 PANTHER CHOLINE/ETHANOLAMINE KINASE 22 412 - -
Gso11g2231 432 MobiDBLite consensus disorder prediction 385 412 - -
Gso11g2231 432 MobiDBLite consensus disorder prediction 385 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2231 Gso-Chr11 38013919 38020131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2231 40 386 Acyl Lipid Metabolism Gene Families AT1G74320 65.130 6.98e-176 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1088 4 17643973 17649784 Gso11g2231 11 38013919 38020131 PCT
Gso6g2543 6 47156053 47162459 Gso11g2231 11 38013919 38020131 PCT
Gso11g2231 11 38013919 38020131 Gso4g1088 4 17643973 17649784 PCT
Gso11g2231 11 38013919 38020131 Gso6g2543 6 47156053 47162459 PCT