Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2230 ATGGTCCAAGAGAAGAAGCTCGTGGACGAAGTGTCGGGTTGGCTGAGACTCTACGAAGACGGTTCAGTAGACCGGACTTGGACCGGTTCGCCAGAAGTTAAATTCTTGGTTGAACCGGTTCCTCCCCATGAAGAATTTATCGATGGAGTTGCCACTCGCGATATCATGGCTGGTGACAATTTCCGTGTCCGGCTTTACCTGCCGGAAAATATCTCCAATGAGGAGAAGCTACCCATTTTCCTCCACTTCCATGGTGGGGGATTTTGCATAAGCGAACCGGACTGGTTCATGTACTACCAATTTTACACTCGATTCGCTCGGGTGGCTCGAGTAATCGTTGTCTCTCCCTTCCTTCGTCGTGCCCCGGAAAATCGTCTCCCTGCAGCGATTGATGACGGCTTCTTTGCACTCCTCTGGTTAGATTCCGTAGCCAGAAGAAATGCAGAGGAGCCGTGGCTCAAAAAACATGGCAATTTTGGCCGTGTTTTTCTTATAGGAGATAGCTCAGGTGGAAATATTGTGCATGAAGTTGCTGTCCGTGCCGGGGAGGCTAAGTTGGACCTGCTCCATCTCGCCGGAGGAATCCCGATACATCCGGGGTTCATGCGGTCGAAACGGAGTAGGTCAGAGTTGGAGAAACCACAATCTCCATTCTTGACGTTGGACATGGTGGACAAGTTCATGAGCTTGGCATTGCCATTGGGTTCTAACAAGGACCACCCCATTGCATGCCCCATGGGCGGCGGCGCTCCGCCGCTTAGCGGGCTGAAACTGCCGCCGATTCTGCTGTGCCTGGCGGAGATGGACTTGATCTTTGACACAGAGATGGAGTACTACGAAGCCATGAAGAAGGCCAACAAAGATGTGGAGTTGTTTGTTAACAAAGGAGCGACTCATAGTTTCTATCTCAACAAAATTGCGGTGGATATGGACCCAAATACTGGTGCTCAAACGGAGGCTCTTATTGCAAGGATCAAAGAGTTCATTGAGCAGCACTAA 999 0.5065 MVQEKKLVDEVSGWLRLYEDGSVDRTWTGSPEVKFLVEPVPPHEEFIDGVATRDIMAGDNFRVRLYLPENISNEEKLPIFLHFHGGGFCISEPDWFMYYQFYTRFARVARVIVVSPFLRRAPENRLPAAIDDGFFALLWLDSVARRNAEEPWLKKHGNFGRVFLIGDSSGGNIVHEVAVRAGEAKLDLLHLAGGIPIHPGFMRSKRSRSELEKPQSPFLTLDMVDKFMSLALPLGSNKDHPIACPMGGGAPPLSGLKLPPILLCLAEMDLIFDTEMEYYEAMKKANKDVELFVNKGATHSFYLNKIAVDMDPNTGAQTEALIARIKEFIEQH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2230 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Gso11g2230 332 Gene3D alpha/beta hydrolase 6 331 IPR029058 -
Gso11g2230 332 SUPERFAMILY alpha/beta-Hydrolases 6 331 IPR029058 -
Gso11g2230 332 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 330 - -
Gso11g2230 332 PANTHER ARYLACETAMIDE DEACETYLASE 3 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2230 Gso-Chr11 38011004 38012399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2230 7 330 Carbohydrate Esterase AT5G16080 34.731 7.26e-55 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2550 6 47241652 47243146 Gso11g2230 11 38011004 38012399 PCT
Gso11g2230 11 38011004 38012399 Gso6g2550 6 47241652 47243146 PCT