Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2228 ATGGCGGCCACGCCTCCTTCGTTCTCTCCCTCTCGCACAACCTGCGCCTCTCTCCTCCGCGAATTGCAGATGATATGGGATGAGATTGGGGAGAGTGACAACGATAGAGACAACACGCTTCTTCAACTGGAGCAAGAGTGCCTGGACATTTATCACCGGAGAGTCGAGGAGACGAGGAAGCACAAGGCTGACCTGTATCAGTGGTTGGCTGAAGCTGAAGCGGAAGTAGCCAATATTGTTTCTTCCCTTGGAGAATGTACCATACTTCCACGGGGGAAAGGAACTCTGAAGCAGCAAATAGCTACCATTAGACCTGTCATAGAGGACTTGAGGTCAAAGAAGGATGACAGAATCAAGGAATTTTCGAAGATAAAGTCTCAAATTTCTCATATATGTGCTGAAATAGCAGGTTGTGGACAATACAATAGTGTCACAGATTCAGATAATCAAAGTGACCTGACAACAAAGAAATTGCGAGAACTCAAGTCGCATCTCCAGGAGCTTCAGAATGAAAAGATCTTGCGCCAGCAGAAAGTGAAGAGTCATATTAGTACTATTAGTGAGCTTACAGTAGTAATGTCAATGGATTTTAGGGAGACACTAAATGAAATTCACCCAAGCTTGGGAGATTCATCGAAAGGTACGCTACAGAGCATCAGCAATGACACTCTTGCCAGATTAACTGGGGTTATTCATTCATTAAAGAGGGAGAAGCAAAAAAGGCTACAAAAGATACAAGAGCTTGCTAAATTGCTGGTAGAGCTATGGGAACTTATGGAGACACCAATTGAAGATCAGCAGGCCTTTAGCCATGTTACTAGATTAATTTCAGCATCAGTTGATGAAGTGTCTACAGAATGTTGCCTTTCTGCAGAAGTCATTGAGCAGGTTGAAGTTGAAGTCCAGCGACTAAATGTTGTGAAAGCCAGTAAGATGAAGGATTTAGTGTTTAAGAGGCAGAATGAGCTTGAAGAAATTTACAGAGGAGTTCACATGGATGTTGATAGTGAAGCTGCCAGACAGATTTTGACCAGCCTCATCGAATCTGGTAATATTGATCTGTCTGATTTGCTTCAAAGCATGGATGATCAAATAAGACAAGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGGTAGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAACCGATATAGTGCAGTAAGAGGAGCACACAAAAATTTGAAACGTGCTGAGAAAGCACGGATTCTTGTCAGCAAGTTACCATCTATTGTTGAGAATTTGACTGCAAAAGTAAAAGCATGGGAAATGGAAAAAGGAATACCTTTCTTATATGAAAAGGTTCCATTGTTACATAACTTGGATGAATATATTGTACAACGGCAACTGAGAGAAGAAGAGAAGCGCAAATATCGGGAGCAGAAGAGGCTACAAGAACAACACGCTGTAGAGCAAGAGGCACTTTTTGGTTCAAGGTCTGCAACAAAAAAGCCTCTGGGTCAGAGCACTCATGCTAACACCATACTTGGGACACCAACTGGGCGTCGAATGCTTTCGACGCCTTCTGGCCGCCATGGAAACTCAGGAGGAAAGGACCGTAGAGAAAGTGGCAGAGTGAACAGCATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGACTCTGTTTCTAGGGGGAATTAA 1704 0.4284 MAATPPSFSPSRTTCASLLRELQMIWDEIGESDNDRDNTLLQLEQECLDIYHRRVEETRKHKADLYQWLAEAEAEVANIVSSLGECTILPRGKGTLKQQIATIRPVIEDLRSKKDDRIKEFSKIKSQISHICAEIAGCGQYNSVTDSDNQSDLTTKKLRELKSHLQELQNEKILRQQKVKSHISTISELTVVMSMDFRETLNEIHPSLGDSSKGTLQSISNDTLARLTGVIHSLKREKQKRLQKIQELAKLLVELWELMETPIEDQQAFSHVTRLISASVDEVSTECCLSAEVIEQVEVEVQRLNVVKASKMKDLVFKRQNELEEIYRGVHMDVDSEAARQILTSLIESGNIDLSDLLQSMDDQIRQAKEQALSRRDILDRVEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKLPSIVENLTAKVKAWEMEKGIPFLYEKVPLLHNLDEYIVQRQLREEEKRKYREQKRLQEQHAVEQEALFGSRSATKKPLGQSTHANTILGTPTGRRMLSTPSGRHGNSGGKDRRESGRVNSIIPVNYVALPKDDSVSRGN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2228 567 MobiDBLite consensus disorder prediction 489 551 - -
Gso11g2228 567 Coils Coil 151 178 - -
Gso11g2228 567 Coils Coil 351 371 - -
Gso11g2228 567 Gene3D - 365 498 - -
Gso11g2228 567 MobiDBLite consensus disorder prediction 502 533 - -
Gso11g2228 567 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 562 - -
Gso11g2228 567 Coils Coil 231 251 - -
Gso11g2228 567 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 504 - -
Gso11g2228 567 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 562 IPR007145 GO:0000226|GO:0008017
Gso11g2228 567 Coils Coil 461 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2228 Gso-Chr11 37981075 37987873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2228 13 533 EF-hand Containing Proteins AT5G62250 37.500 1.16e-96 303