Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2219 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTCACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCTTGGAAGAAAGCTCGATGGGAGGCTGCTGAAAAAGTTGAAGAGGAAGCTGGTGTCCGTCAATGCTGTGGTTGATGATGCAGAACAAAAGCAGTTCACTGATGCATATGTGAAAGCATGGCTTGATGACGTCAGAGACGTGTTGCTTGATACCGAGGATCTGTTGGATGAAATAGACTGCGAATTCTCCAAAACTGAGTTGGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAAGGATCATAGATGTCCTTGATGACCTAGATTCTCTTTTAGACCAAAAGAATGATCTAGGTTTGAAAAATGTTAGTGATGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTCACAGAAATTGTCATCCACATCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATTATGACAAAGATATGATCCTTAATTGGCTGACTTCTGACACTGACAATCATAACAAGATATCAATACTTTCGATTGTGGGAATGGGTGGGATGGGTAAGACCACGCTTGCCCAACATGTATATAACAACCCAAGGATACAGGAGGCTAAATTTGACATCAAAGTCTGGGTCTGTGTTTCGGATGATTTTGATGTTTTGATGTTAACCAAGACAATTCTTAACAAAATCACTAAATCAAAAGAAGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAAAAGTTGTCGGGGAATAAATATCTTCTCGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAAGGTTGCTTCAATCATGCAGTCAAACAAAGTACATGAACTAAAGAAATTACAAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTGTCCTAAGTTGAATGCTGAGCTGAAGGAGATTGGTATAAAGATAGTTAAGAAGTGCCAAGGGTTGCCTCTAGCCTTAGAAACAGTTGGATGTCTTTTACACAAAAAGCCATCTGTTTCACAATGGGAAGGTGTATTGAAAAGCAAGATGTGGGAGTTACCGATCGAAGACAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCCTTATTCCCCAAAGATCACCGGTTTTACATGGAGGGTTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATGCTCTACCCAGAGTAATCCTCAAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACGATCAAGTAGAGAAAAGTGTTTTGTCATGCATGATCTTCTCAATGATTTGGCAAAATATGTTTGTGGAGACATTTGTTTCAGGTTAGAAGTTGATACACCAAAAAGTATATCAAAAGTCCGTCATTTTTCATTTGTACCTGAATACGATCAATATTTGGATGGGTACGAGAGTTTATATCATGCTAAAAGGCTACGGACATTTATGCCCATACGAGATACATTTATTTGGGGTGGTAGGAAACTAGTAGATGAGTTGTTCTCCAAGTTTAAGTTCTTACGCATCTTATCTTTGTCTCATCATAACCTTAAAGAGATGCCTGACTCAGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTCCAATACTCGCATAAAAAAACTACCTGATTCAACATGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATTTTTGTCACCTTTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGCTGTCTTGAATTTATGTTGACTAAAGTGAGAAAGATGCCAATGCATATTGGAAAACTGAAGAATCTTCAGGTGTTGAGTTCGTTTTATGTTGGAATGGGCAGCGACAACTGCAGTATTCAACAGCTAGGGGAACTCAATCTTCGTGGAAGGCTATCAATTGAGGAGCTGCAAAATATTGTGAATCCCTTGGATGCATTGGCCGCAGATTTGAAAAATAAAACTCATCTTCTGGATCTAGAGTTAGAATGGAATGAGGGCCGGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTTGAGAATCTGCAACCTTCAAGACATTTGGAGAAATTGTCAATCCGGAACTACAGTGGTACTCAATTTCCTAGTTGGTTATCGGATAATTCATCATGTAATGTGGTGTCCTTAAGCTTGAAGAACTGTAAATATTGCCTATGTTTGCCTCGCCTTGGACTTTTGCCATTTCTGAAGGAGCTTTCAATTGGAGGGCTTGATGGGATCGTGAGTATTAATGCTGATTTTTTCGGGAGTAGCTCTTCTTCATTTGCATCCTTGGAATCTTTGGAGTTCTACGATATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTGCTTTTCCACGTCTTCAACGTCTTTCTATGGAGTGTTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGTCATTTAAATGATCTAAAGATTTCTGGGTGCGAACAACTTGTACCTTCTGCTCTCAGTGCCCCAGATATTCATCAATTAACCCCAGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAAGAGCTTACCATTACAGGTCACAACATGGAGGCAGCGTTACTCGAACAGATTGGACGCAATTACTCTTGTTCAAATAAGAATATTCCCATGCACAGTTGCTATGATTTCCTTGTATGGTTGCGCATCAATGGTGGCTGCGACTCTCTAACGACCATTCACTTAGATATCTTCCCAAAACTCAAGGAGCTTCATTTCGGGAAGTGTCCTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCAGCGTCTGAGTATGAGAGAGTGCCCCCAATTAGAATCATTGCCTGAAGGAATGCATGTCCTCCTTCCATCTCTTGATCATCTGGGCATAGGTGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAAGATATGGGTCTTTATGGTAGTTCCAAATTTATCTCCTTATTGAAAAGTGCCTTGGGAGGCAATCAATCTCTATTTATCTTAGGTATTGGAGGACTGGATGTTGAGTGTCTTCCGGAGGAAGGTGTGCTGCCACAATCTCTTGTTATTCTACGGATAAGGGAGTGTGGAGATCTAAAAAGACTGGACTACAAAGTTCTCTGCCACCTCTCCTCTCTCTCGATATTGATTCTTGAAGACTGCCCCAGGCTCGAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAACTTTGCACATTCGGAACTGTCCGTTGCTCAATCAACGTTGCCAGGAACCCGAAGGTGAAGACTGGCCAAAGATTGCTCACATTAAACGCGTGTCATTAAACGGAAACTAG 3546 0.4092 MPVLETLGGALFGAVLQVLFHKLDSHQVLDYFLGRKLDGRLLKKLKRKLVSVNAVVDDAEQKQFTDAYVKAWLDDVRDVLLDTEDLLDEIDCEFSKTELEAESQTSASKVCDFESRIIDVLDDLDSLLDQKNDLGLKNVSDVGVGSGSGSKVSQKLSSTSLVVESVIYGRDYDKDMILNWLTSDTDNHNKISILSIVGMGGMGKTTLAQHVYNNPRIQEAKFDIKVWVCVSDDFDVLMLTKTILNKITKSKEDSGDDLEMVHGRLKEKLSGNKYLLVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNKVASIMQSNKVHELKKLQEDHSWQVFAQHAFQDDCPKLNAELKEIGIKIVKKCQGLPLALETVGCLLHKKPSVSQWEGVLKSKMWELPIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHRFYMEGLIQLWVAENFVQCSTQSNPQEEIGEQYFNDLLSRSFFQRSSREKCFVMHDLLNDLAKYVCGDICFRLEVDTPKSISKVRHFSFVPEYDQYLDGYESLYHAKRLRTFMPIRDTFIWGGRKLVDELFSKFKFLRILSLSHHNLKEMPDSVGNLKHLRSLDLSNTRIKKLPDSTCFLCNLQVLKLNFCHLLEELPSNLHKLTNLRCLEFMLTKVRKMPMHIGKLKNLQVLSSFYVGMGSDNCSIQQLGELNLRGRLSIEELQNIVNPLDALAADLKNKTHLLDLELEWNEGRNLDDSIKERQVLENLQPSRHLEKLSIRNYSGTQFPSWLSDNSSCNVVSLSLKNCKYCLCLPRLGLLPFLKELSIGGLDGIVSINADFFGSSSSSFASLESLEFYDMKEWEEWECKGVTGAFPRLQRLSMECCPKLKGHLPEQLCHLNDLKISGCEQLVPSALSAPDIHQLTPGDCGKLQIDHPTTLKELTITGHNMEAALLEQIGRNYSCSNKNIPMHSCYDFLVWLRINGGCDSLTTIHLDIFPKLKELHFGKCPNLQRISQGQAHNHLQRLSMRECPQLESLPEGMHVLLPSLDHLGIGDCPKVEMFPEGGLPSNLKDMGLYGSSKFISLLKSALGGNQSLFILGIGGLDVECLPEEGVLPQSLVILRIRECGDLKRLDYKVLCHLSSLSILILEDCPRLECLPEEGLPKSISTLHIRNCPLLNQRCQEPEGEDWPKIAHIKRVSLNGN* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2219 1181 PANTHER DISEASE RESISTANCE PROTEIN RP 32 1017 IPR044974 GO:0006952
Gso11g2219 1181 SUPERFAMILY L domain-like 488 884 - -
Gso11g2219 1181 SUPERFAMILY L domain-like 939 1171 - -
Gso11g2219 1181 Gene3D Ribonuclease Inhibitor 557 944 IPR032675 -
Gso11g2219 1181 Gene3D - 148 325 IPR027417 -
Gso11g2219 1181 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Gso11g2219 1181 PANTHER OS05G0414200 PROTEIN 32 1017 - -
Gso11g2219 1181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Gso11g2219 1181 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2219 1181 PRINTS Disease resistance protein signature 268 282 - -
Gso11g2219 1181 PRINTS Disease resistance protein signature 365 379 - -
Gso11g2219 1181 PRINTS Disease resistance protein signature 590 606 - -
Gso11g2219 1181 Pfam Rx N-terminal domain 13 103 IPR041118 -
Gso11g2219 1181 Gene3D - 413 499 IPR036388 -
Gso11g2219 1181 Gene3D - 328 412 IPR042197 -
Gso11g2219 1181 Gene3D - 16 128 - -
Gso11g2219 1181 ProSiteProfiles Leucine-rich repeat profile. 594 615 IPR001611 GO:0005515
Gso11g2219 1181 Coils Coil 42 62 - -
Gso11g2219 1181 Gene3D Ribonuclease Inhibitor 959 1179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2219 Gso-Chr11 37873864 37879846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2219 191 835 WRKY Transcription Factor Family AT5G45050 23.851 3.17e-11 66.2