Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2217 ATGCCAGTACTAGAAACCCTTGGTGGTGCTCTTTTTGGTGCTGTCCTTCAGGTGCTGTTTGACAAGCTGGATTCTCATCAAGTTTTGGATTACTTTCTTGGAAGAAAGCTCGATGGGAGACTGCTGAAAAAGTTGAAGTGGAAGCTGGTGTCTGTCAATGCTGTTGTTGATGATGCAGAACAAAAGCAGTTCACTGATAAAAATGTGAAAGAATGGCTTGATGACGTCAGAGACGTGTTGCTTAATACCGAGGATCTGTTGGAGGAAATAGACTGCGAATTCACCAAAACTGAGTTGGAAGCTGAATCCCAGACCAGTGCTAGCAAGGTATGCGATTTTGAATCAATGATCAAAGATGTCCTTGATGAACTAGATTCTCTTTTAAATTTAAAGGATACTCTACGTTTGAAAAATGTTAGTGGTGATGGGGTTGGATCAGGATCGGGTAGTAAAGTGTCACAGAAATTGTCATCCACATCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATGATGACAAAGATATGATCCTTAATTGGCTGACTTCTGACACTGACAATCATAACAAGATATCAATACTTTCGATTGTGGGAATGGGTGGGATGGGTAAGACCACTCTTGCCCAACATGTATATAACAACCCAAGGATAGAGGAGGCTAAATTTGACATCAAAGTCTGGATCTGTGTTTCGGATGATTTTGATGTTTTGATGTTAAGCAAAACAATTCTTAACAAAATCACTAAATCCAAAGATGACAGTGGAGACGACCTAGAAATGGTTCATGGAAGATTGAAAGAAAAGTTGTCGGGGAATAAATATCTTTTCGTTCTGGATGATGTTTGGAACGAAGATCGAGACCAATGGAAGGCTTTACAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACGACTCGCAGTAACAATGTTGCTTCAACCATGCAGTCAAACAAAGTACATGAACTAAAGCAATTACGAGAAGATCACAGCTGGCAAGTTTTCGCTCAGCATGCATTCCAAGATGATTATCCTAAGTTGAATGCTGAGCTGAAGGAGATTGGTATAAAGATAATTGAGAAGTGCCAAGGGTTGCCTCTAGCCTTAGAAACAGTTGGATGTCTTTTACACAAAAAGCCATCTATTTCACAATGGGAAGGTGTATTGAAAAGCAAGATATGGGAGTTACCAAAAGAAGAAAGTAAAATCATCCCTGCTTTATTGTTGAGCTATTTCCATCTTCCTTCTCATCTGAAGAGATGTTTCGCTTATTGTGCCTTATTCCCCAAAGATCACAAGTTTTACAAGGAGAGCTTAATTCAGTTATGGGTGGCTGAAAATTTTGTACAATGCTCTCAACAGAGTAATCCTCAAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACGATCAAGTATAGAAAAGTGTTTTTTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTTTGTGGGGACATCTGTTTCAGGTTACAAGTTGATAAACCAAAAAGCATATCAAAAGTCCGTCATTTTTCATTTGTAACTGAATTTGATCAATATTTTGATGGGTACGGGAGTTTATATCATGCTCAAAGGCTACGAACATTTATGCCCATGCCTCTACTATTTATAAAGTGGGGTGGTAGGAAACTAGTAGATGAGTTGTTCTCGAAGTTTAAGTTCTTACGCATCTTATCTTTGTCTCAATGTGACCTTAAAGAGATGCCTGACTCTGTAGGCAATCTTAAGCATCTTCGTTCGTTAGACCTTTCCGGTACTTACATAAAAAAACTACCTGATTCAACGTGTTTTCTCTGTAACTTGCAAGTCTTGAAGCTGAATAATTGTTTCCTTTTGGAGGAGCTACCCTCAAATTTGCATAAACTCACCAATTTGCGTTGTCTTGAATTTATGCACACTAAAGTGAGAAAGATGCCAATGCATTTTGGAAAACTGAAGAATCTTCAGGTGTTGAGTTCGTTTTACGTTGGAAAGGGCATCGACAACTGCAGTATTCAACAGCTAGGGGAACTCAATCTTCATGGAAGCTTATCAATTGAGGAGCTGCAAAATATTGTAAATCCCTTGGATGCATTGGCAGCAGATTTGAAAAATAAAACTCATCTTCTGGATCTAAAGTTAGGATGGAATCGGGGCCGGAACCTTGATGATTCAATAAAAGAAAGACAAGTACTAGAGAATCTGCAACCTCCAAGACATTTGGAGAAATTGTCAATCCGATACTACGGTGGTACTCAATTTCCTAGTTGGTTATCGGATAATTCATTATGTAATGTGGTGTCCTTAACCTTGACGAACTGTAAATATTTCCTATGTTTGCCTCCCCTTGGACTTTTGCCATTTCTGAAGGAGCTTTCAGTTGAAGGGCTTGATGGGATTGTGAGTATCAATGCTGATTTTTACGGGAGTAGCTCTTGTTCATTTACATCCTTGGAATCTTTGAAGTTCGACAATATGAAGGAATGGGAAGAATGGGAATGTAAAGGTGTGACAGGTGCTTTTCCACGTCTTCGACGTCTTTTTATAATGCGTTGTCCCAAGCTGAAAGGGCACTTGCCAGAGCAACTATGCCATTTAAATTATCTAAAGATCTCTGGGTGTGAACAACTTGTACCTTCTGCTCTCAGTGCCCCTGATATTCATCAATTATCCCTAGGAGACTGTGGAAAGCTGCAAATTGATCATCCGACAACTTTGAAAGAGCTTATCATTGAAGGTCACAACGTGGAGGCAACCTTACTGGAAGAGATTGGACGCAATTACTCTTGTTCAAATAACAATATTCCCATGCACAGTTGCTATGATTTCCTTGTATGGTTGGGCATCAGTGGTGGCTGCGACTCTCTAACCACCATTCACTTAGATATGTTCCCAATACTCAAGAACCTTCTTTTCCGGAACTGTCCTAATCTACAGAGGATTTCACAGGGGCAGGCTCATAATCATCTCCAGTGGCTGAATATCGATAAGTGCCCTCAATTAGAATCATTACCTGAAGAAATGCATGTCCTCCTTCCATCTCTTGATTCTCTGTGGATAGATGATTGTCCAAAAGTTGAAATGTTTCCCGAAGGAGGTTTGCCATCAAATTTAAAAGTTATGTGTCTCCATGGTGGTAGTTACAAACTTATGTCCTTATTGAAAAGTGCCTTGGGAGGCAATCACTCTCTGGAAAGCTTATCTATTGGAGGAGTGGATGTTGAGTGTCTTCCTGACGAAGGTGTACTGCCACACTCTCTTGTTACTCTAGACATCAGACATTGTGAAGATCTAAAAAGACTGGACTACAAAGGTCTCTGCCACCTCTCCTCTCTCAAGAAATTGCGTCTTGTTGACTGCCCCAGGCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAACTTTGAACATTTGGGACTGTCAGTTGCTCAAACAACGTTGCCGGGAACCCGAAGGCGAAGACTGGCCAAAGATTGCTCACATTAAACGCGTGTCGTTAAACGGTGGTTAA 3552 0.4017 MPVLETLGGALFGAVLQVLFDKLDSHQVLDYFLGRKLDGRLLKKLKWKLVSVNAVVDDAEQKQFTDKNVKEWLDDVRDVLLNTEDLLEEIDCEFTKTELEAESQTSASKVCDFESMIKDVLDELDSLLNLKDTLRLKNVSGDGVGSGSGSKVSQKLSSTSLVVESVIYGRDDDKDMILNWLTSDTDNHNKISILSIVGMGGMGKTTLAQHVYNNPRIEEAKFDIKVWICVSDDFDVLMLSKTILNKITKSKDDSGDDLEMVHGRLKEKLSGNKYLFVLDDVWNEDRDQWKALQTPLKYGAKGSKILVTTRSNNVASTMQSNKVHELKQLREDHSWQVFAQHAFQDDYPKLNAELKEIGIKIIEKCQGLPLALETVGCLLHKKPSISQWEGVLKSKIWELPKEESKIIPALLLSYFHLPSHLKRCFAYCALFPKDHKFYKESLIQLWVAENFVQCSQQSNPQEEIGEQYFNDLLSRSFFQRSSIEKCFFMHDLLNDLAKYVCGDICFRLQVDKPKSISKVRHFSFVTEFDQYFDGYGSLYHAQRLRTFMPMPLLFIKWGGRKLVDELFSKFKFLRILSLSQCDLKEMPDSVGNLKHLRSLDLSGTYIKKLPDSTCFLCNLQVLKLNNCFLLEELPSNLHKLTNLRCLEFMHTKVRKMPMHFGKLKNLQVLSSFYVGKGIDNCSIQQLGELNLHGSLSIEELQNIVNPLDALAADLKNKTHLLDLKLGWNRGRNLDDSIKERQVLENLQPPRHLEKLSIRYYGGTQFPSWLSDNSLCNVVSLTLTNCKYFLCLPPLGLLPFLKELSVEGLDGIVSINADFYGSSSCSFTSLESLKFDNMKEWEEWECKGVTGAFPRLRRLFIMRCPKLKGHLPEQLCHLNYLKISGCEQLVPSALSAPDIHQLSLGDCGKLQIDHPTTLKELIIEGHNVEATLLEEIGRNYSCSNNNIPMHSCYDFLVWLGISGGCDSLTTIHLDMFPILKNLLFRNCPNLQRISQGQAHNHLQWLNIDKCPQLESLPEEMHVLLPSLDSLWIDDCPKVEMFPEGGLPSNLKVMCLHGGSYKLMSLLKSALGGNHSLESLSIGGVDVECLPDEGVLPHSLVTLDIRHCEDLKRLDYKGLCHLSSLKKLRLVDCPRLQCLPEEGLPKSISTLNIWDCQLLKQRCREPEGEDWPKIAHIKRVSLNGG* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2217 1183 Gene3D - 413 499 IPR036388 -
Gso11g2217 1183 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Gso11g2217 1183 Gene3D Ribonuclease Inhibitor 941 1180 IPR032675 -
Gso11g2217 1183 Gene3D - 328 412 IPR042197 -
Gso11g2217 1183 Gene3D - 16 126 - -
Gso11g2217 1183 Gene3D - 148 325 IPR027417 -
Gso11g2217 1183 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Gso11g2217 1183 Gene3D Ribonuclease Inhibitor 553 940 IPR032675 -
Gso11g2217 1183 SUPERFAMILY L domain-like 489 888 - -
Gso11g2217 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Gso11g2217 1183 PRINTS Disease resistance protein signature 193 208 - -
Gso11g2217 1183 PRINTS Disease resistance protein signature 268 282 - -
Gso11g2217 1183 PRINTS Disease resistance protein signature 365 379 - -
Gso11g2217 1183 PRINTS Disease resistance protein signature 591 607 - -
Gso11g2217 1183 SUPERFAMILY L domain-like 940 1173 - -
Gso11g2217 1183 Pfam Rx N-terminal domain 13 102 IPR041118 -
Gso11g2217 1183 Coils Coil 42 62 - -
Gso11g2217 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1018 IPR044974 GO:0006952
Gso11g2217 1183 Coils Coil 117 137 - -
Gso11g2217 1183 PANTHER OS05G0414200 PROTEIN 27 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2217 Gso-Chr11 37835277 37840907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2217 191 816 WRKY Transcription Factor Family AT5G45050 24.251 5.79e-11 65.5