Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2214 ATGTCTGAAGAAACACGGAGAATTGTGGTGATCCACTATGCATCAAGAGACTTCAATACAAGTGCCATTAAAGTTGTCATGGAGGGATATTCACTTGGGCATGGAGACAAGCTTACACTTCTTGTAGTTCTTCGCCATGCTAATAGTCCTAGTAGGATTCCCTTCATTGCATCTGCCAGATTGCGTGGATTATTTGAGACTGATCACAAAATTGTTGAGAAAGAGGTTGCCAAGATGAAAGAAGAGATCCTTAATAATGCAAGCATAAGGGAAATCTCCGAGCAGTGTGAAGCAGAAAGGATCCAGTTCCGGATAGAAGTGCTTCAAGGCAATTTACCTGAGGTTGCTGTAAATGCTGCCACCCGTTTGGAGGCAAAAACAGTGATACTTGATAGACAGATGAAGAAATATAAGAAGAATTTCAAGCAGAGTCTCTCTTGTGCTTTACTAATAATGAACCGTGACAACACTTTGCGACACTTGAGAGGACCAAGGGAAACGCAGCTGTCAGATGGAAGCAATGGCAATGCAAATTTTGCAAGTTCCTATTCTAAATCTCCACAAAGAATACAGCAAGTCGCAAATGCAATTTTCTGCTCCAATTCCAGCTCTTCAATTCAAACTCTTACAAAGGTTGTGTGCCCCCAATCTCATTCTCAAATGAAACAATTCCTTGACAATAGAGAACAAGACATGGCAAGAGGGTATTGCATATTACCAACTTCTGATACTCGAAATACTAATCATACTGACTTGTATCACATAGAGACACCAGTGGAACATAGCAACAACCCTGAATCATATCAAATAGTTGAACAATTTAAAAATTCTGTTTGCTCAGTATGCAATAACAGAAGACCAAAATTTGAACCACTGAAAGAATTCACATACGCGGAGCTGCATGAAGCCACACAGGGTTTTACCCCAAAGAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGGAAGCTGCAAGGAGGACTCAGGATTGCCGTGAAGCAACACAAGTGTGCAAGCTTCCAAGGAGATAAGGAATTCAAATCTGAAGTTAATGCACTCAGCAGAGCAATACATGAGAATGTGGTTATGCTGCGTGGATCTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCGCTCGACCAACATTTATCGCAACACTCACGTAAACCTCTTAGCTGGGCAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTATTGTTCTTGCATCAGAACAATATAATACACAGAGATGTGAGACCTAGTAACATCCTTGTCACACATGACTATGAAGCAATGCTTGGAGATTTCGGTCTAGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTAGTTGGAACTATAGGGTATTTGGCACCAGAATATGCTGAATCTGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGCAGACAAACGGCTTGGAGATAAAAGTCTTGTGGGATGGGCTAGGCCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGAAAATCATGATTGCCATCAGCTCTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACTGTGGTCACTGCCTTAACTCATATACTTGAAGGCAACACATGCAGTGTCGTACTGAGAGACTGTTCTCCAGCTCGGTCAGATTCATCCTATGACATGTCAGACTTACTTATATCAGATGCCTCTCAGAAATTAGAAGGTGAAGATGCAAGCATCTATGCAGGATATGCTCCCATTTGGTTAAGACCCCCACCATCTCCTCCGTTAGGAAGCACTTCATCATGTACATCAAGCATGTTCACAGGGCCAAGTGAATCTTCTTTAGAAGAGTTGTCCAATGATGAGAATAAGGGTAAGAAGCCAAATGATCAAGGTGGGATATTTTAA 2019 0.4121 MSEETRRIVVIHYASRDFNTSAIKVVMEGYSLGHGDKLTLLVVLRHANSPSRIPFIASARLRGLFETDHKIVEKEVAKMKEEILNNASIREISEQCEAERIQFRIEVLQGNLPEVAVNAATRLEAKTVILDRQMKKYKKNFKQSLSCALLIMNRDNTLRHLRGPRETQLSDGSNGNANFASSYSKSPQRIQQVANAIFCSNSSSSIQTLTKVVCPQSHSQMKQFLDNREQDMARGYCILPTSDTRNTNHTDLYHIETPVEHSNNPESYQIVEQFKNSVCSVCNNRRPKFEPLKEFTYAELHEATQGFTPKNYLSEGGFGSVYKGKLQGGLRIAVKQHKCASFQGDKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLSWAERIKVAIGAAKGLLFLHQNNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTADKRLGDKSLVGWARPLLKERNYPDLIDERMMENHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVTALTHILEGNTCSVVLRDCSPARSDSSYDMSDLLISDASQKLEGEDASIYAGYAPIWLRPPPSPPLGSTSSCTSSMFTGPSESSLEELSNDENKGKKPNDQGGIF* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2214 672 Gene3D Transferase(Phosphotransferase) domain 1 383 585 - -
Gso11g2214 672 MobiDBLite consensus disorder prediction 635 653 - -
Gso11g2214 672 ProSiteProfiles Protein kinase domain profile. 307 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2214 672 PANTHER OS01G0253100 PROTEIN 7 642 IPR045271 GO:0004714|GO:0006468
Gso11g2214 672 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Gso11g2214 672 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Gso11g2214 672 MobiDBLite consensus disorder prediction 631 672 - -
Gso11g2214 672 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 642 - -
Gso11g2214 672 Pfam Protein tyrosine and serine/threonine kinase 311 570 IPR001245 GO:0004672|GO:0006468
Gso11g2214 672 SMART tyrkin_6 307 570 IPR020635 GO:0004713|GO:0006468
Gso11g2214 672 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2214 Gso-Chr11 37799156 37804789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2214 295 570 Trihelix Transcription Factor Family AT1G70460 47.902 2.98e-80 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso11g2214 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2573 6 47493112 47496607 Gso11g2214 11 37799156 37804789 PCT
Gso11g2214 11 37799156 37804789 Gso6g2573 6 47493112 47496607 PCT