Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2204 ATGGAAGAGAATGTTAAGCAGCCATTGTTGGAGAGGAAGTACTACGAGGACTGCCCAGGTTGTAAAGTGGATCAAGCCAAAGAGTTGAGTGAGGGACAAGGTGTACCTGTTAGAAATCTTTTCATCATATGGATGGTGGTGTTGTGTGCTGACAAACACAGTTGCTACAAGGTTGCTAAACTAGCGTTGCCCATATCGTCTCTCTTCCCCTTCCTTTATTTCATGGTAAGGGATTTTAATATTGCAAAAACAGAAGCTGACATTAGTTCTTATGCTGGTTATGTTGGTTCTGCATTCATGTTTGGAAGATGTTTGACATCTGTAATGTGGGGTATTGTAGCTGATCGCTATGGCCGAAAGCCTGTTATAGTTATAGGGATTATTGTAGTTGTCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCAGTTATAATGAGATTTCTTCTGGGAAGTTTAAATGGTTTGCTTGGACCAGTGAAGGCCTATGCCACTGAACTTTTTCGAGAAGAACACCAGGCTCTGGGACTCTCAACTGTCAGTGCAGCTTGGGGAGTAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTGGCTCGGCCAGTAGAGAAGTACCCCCATATATTTTCAAAGGATTCCTTCTGGGATAAGTTTCCTTACTTCTTGCCCAACTTTATAATATCAGCAGTTGCATTTGTAGTAGTCATTGGTTGTATCTGGATTCCGGAGACACTTCACAACCACAATTGTAGAAATGAATCCATAGACAATGCTGAAGCTTTAGAAAACGGTGGCAGTGTGGCCAGTAAAGACAAGATAATCCAAAAGAAGGAAAACCTCCTCCTGAACTGGCCCTTAATGTCATCGGTCATTGTTTATTGTGTTTTCGCACTTCATGATATTGCATATCAAGAGGTTTTCTCATTATGGGCTGTGAGTCCTCAAAGGTTGGGGGGTTTGAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTAGCACTTATCATTTACCAACTTACCATATACCCATCCGTGGAAAAAGCTAGTGGACCTATTGTTATTGGTCGCATTTCTGGGATGATATCCATACCACTTTTGCAAAGTTACCCCTTCATAGCGTTGTTGTCAGGCTTAGCAATATACATAGTGTTAAGTATTGCTTCAGTTTTGAAGAATATTCTGTCTGCGACCATTAATACTGGTTTGTTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGGGGGGCAGCTAATGGCATTTCCATGACAGGCATGTCTCTATTCAAAGCTATTGGCCCTGCTACAGGTGGTGCAATATTAACTTGGTCACAAAAGCGAATGGATGCTTCATTTCTCCCAGGCACCCATATGGTCTTCTTTGCCTTGAACATAGTTGAAGCACTTGGATTACTAATGTTGTTCAAACCATTCCTAGTTGAAAAGAACAAAACGCACTCAAATCAGTTACATTGA 1497 0.4135 MEENVKQPLLERKYYEDCPGCKVDQAKELSEGQGVPVRNLFIIWMVVLCADKHSCYKVAKLALPISSLFPFLYFMVRDFNIAKTEADISSYAGYVGSAFMFGRCLTSVMWGIVADRYGRKPVIVIGIIVVVIFNTLFGLSTSFWMAVIMRFLLGSLNGLLGPVKAYATELFREEHQALGLSTVSAAWGVGLIIGPALGGYLARPVEKYPHIFSKDSFWDKFPYFLPNFIISAVAFVVVIGCIWIPETLHNHNCRNESIDNAEALENGGSVASKDKIIQKKENLLLNWPLMSSVIVYCVFALHDIAYQEVFSLWAVSPQRLGGLNFTTDDVGNVLSISGLALIIYQLTIYPSVEKASGPIVIGRISGMISIPLLQSYPFIALLSGLAIYIVLSIASVLKNILSATINTGLFLLQNRAVEQHQRGAANGISMTGMSLFKAIGPATGGAILTWSQKRMDASFLPGTHMVFFALNIVEALGLLMLFKPFLVEKNKTHSNQLH* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2204 498 CDD MFS_SLC46_TetA_like 62 483 - -
Gso11g2204 498 Gene3D MFS general substrate transporter like domains 39 480 IPR036259 -
Gso11g2204 498 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 489 IPR020846 GO:0022857
Gso11g2204 498 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 2 496 - -
Gso11g2204 498 Pfam Major Facilitator Superfamily 65 344 IPR011701 GO:0022857|GO:0055085
Gso11g2204 498 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 2 496 - -
Gso11g2204 498 SUPERFAMILY MFS general substrate transporter 63 484 IPR036259 -
Gso11g2204 498 PRINTS Tetracycline resistance protein signature 123 147 IPR001958 GO:0022857
Gso11g2204 498 PRINTS Tetracycline resistance protein signature 180 202 IPR001958 GO:0022857
Gso11g2204 498 PRINTS Tetracycline resistance protein signature 354 374 IPR001958 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2204 Gso-Chr11 37672099 37678724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1031 4 15422361 15446879 Gso11g2204 11 37672099 37678724 PCT
Gso6g2580 6 47559708 47571078 Gso11g2204 11 37672099 37678724 PCT
Gso11g2204 11 37672099 37678724 Gso4g1031 4 15422361 15446879 PCT
Gso11g2204 11 37672099 37678724 Gso6g2580 6 47559708 47571078 PCT