Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1952 ATGCCAGTGCCTCCCAAACCCATAAACACCTTCACCATCACAATCATGCTCACCTTCGCCTTCTTCCTCCTCTTCTTCTCCGGCTTCCTCCACTTCCCCTCCTCCTCTTTCCCTCCCATCACGCGCCCCATCACAACCACGCCGTCCAAGGCCGAACCCTTCTCCAATCTGGTCGCGGCCTTCAGGCAATGGGACTCGCAAGTGGGGTGCTCTCGCTTCAAAGACAAACCCAATGGGGTGCCCCTTAACCAGTCAAAGGTCGCGTCTTTGCAGGAAGTTGGCGATTGTGGGGGCTTGAAACTCAACCATGTTAGCGTTTTGGTCAAAGGGTGGACTTGGATTCCCGATAACTTGGATAACTTGTACTCTTGCTCTTGTGGCTTGAGCTGCTTGTGGACCAAATCGCCCGTTCTCGCTGACAAGCCTGATGCTTTGTTGTTTGAATCTTCCACGCCTCCTGTTCAGAGACACATGGGAGAACCTCTTCGCGTATATATGGATCTTGAAGCTGGGCGAAAGAGATCAGGTCGAGAGGACATATATATTAGCTACCATGCTGAGGATGATGTACAATCAACCTATGCTGGTGCACTCTTTCACAATGGTCGAAACTACCACGTCTCCAATAAAAAAAACAGAGATATACTTGTTTATTGGTCTTCATCACGTTGTCTTCCTCAAAGGAATGAGCTTGCCAAGAAACTCCTGAGCTTACTGCCACATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGTCTAGACATGGCTCTTTCTCTTTATCCCGAATGTGCAAACGATGCCAACGTTACACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAGAGCTATGTGACAGAGAAGTTATTCTATGCCTTAGACTCTGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAACTCATTGGAAGAGTTGGCTTCATACGTGAAGGCAGTTGCTAATGACCCGGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTACTGGGAAACTATGGAAAAACCCGAGCCATGAGCCTTGACACGTTGCCTTGTCGATTATGCGATTCTGTTAGCAGAAAAGGTGGAAGAAATGCGGCAAGCTAG 1206 0.4693 MPVPPKPINTFTITIMLTFAFFLLFFSGFLHFPSSSFPPITRPITTTPSKAEPFSNLVAAFRQWDSQVGCSRFKDKPNGVPLNQSKVASLQEVGDCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSPVLADKPDALLFESSTPPVQRHMGEPLRVYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNKKNRDILVYWSSSRCLPQRNELAKKLLSLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFNSLEELASYVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCDSVSRKGGRNAAS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1952 401 PIRSF FucT_plant 3 401 IPR017177 -
Gso10g1952 401 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 15 400 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso10g1952 401 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 15 400 - -
Gso10g1952 401 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 393 - -
Gso10g1952 401 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 212 394 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso10g1952 401 Gene3D - 161 368 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1952 Gso-Chr10 46485401 46489134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1952 3 400 Xyloglucan Fucosyltransferase1 AT1G71990 66.915 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1952 K14412 - gmx:100792300 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1952 10 46485401 46489134 Gso10g1952 10 46485401 46489134 ECH
Gso20g1406 20 44239356 44243319 Gso10g1952 10 46485401 46489134 GST