Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02426 ATGGAAGATATCGGTCCGAACTCATGCACGAGGCAAGTGGCAGAGAAGAAAGCAAGACCTCAAGAGCAATTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAACTATAGTCTCACACAGCCCAGATACATCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGAGGGTCTCTCAGAAACGTTCCCGTTGGAGGTGGCTCTAGGAAGAACAAGAGGGTCACCTCATCAAAGGTTCCTCCTGACTTGAATCCACCAAGCCTCTCATCAGTCTCAGCTATTTCTTCCCAAAACCCTAAAATGCAAGGAGTCCATGACCTTAATCTAGCTTTTCCTACAGCTATGGACAATTATCATGGCATGTCTCCATATGTTGAGATGCCAAAACTTGAAATTGGTGGTGATCACAGTACTAGTCATAGTCACCACCATAGCCCTTCTGCTGTTGAGCTACTACGGTCTGGCATGGCTTCTAGGGGTTTGAATCCTTATGCTCCTAATTCCTTGATGTCAACCTCAGATCATTCCCTTTATACAACTGGCTATCCCATGCAGGAAATTAAACCAAACCTTAGCTTTTCAGTTGATGATGGGTTTGGAAATAGATCATATGGGGTTCAAGAGAATGGTGGTGGGAGGCTTTTGTTCCCTTTTGGAGACATCAAGCACCTTTCTGCGGGTGTTGAAGTGGAACACATTAAAGAACGAGGAAACAATTCAACTGGATATTGGACTGGTTGGTGA 759 0.4427 MEDIGPNSCTRQVAEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYICKTCRRYWTEGGSLRNVPVGGGSRKNKRVTSSKVPPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPTAMDNYHGMSPYVEMPKLEIGGDHSTSHSHHHSPSAVELLRSGMASRGLNPYAPNSLMSTSDHSLYTTGYPMQEIKPNLSFSVDDGFGNRSYGVQENGGGRLLFPFGDIKHLSAGVEVEHIKERGNNSTGYWTGW 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02426 252 MobiDBLite consensus disorder prediction 75 99 - -
Gma19g02426 252 MobiDBLite consensus disorder prediction 65 99 - -
Gma19g02426 252 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Gma19g02426 252 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Gma19g02426 252 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Gma19g02426 252 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 251 IPR045174 GO:0003700|GO:0006355
Gma19g02426 252 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 7 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02426 Gma-Chr19 52751676 52753714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02426 13 251 C2C2-Dof Transcription Factor Family AT3G61850 47.909 8.98e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma19g02426 zf-Dof 8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02426 - - gmx:778111 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02426 19 52751676 52753714 Gma19g02426 19 52751676 52753714 ECH
Gma19g02426 19 52751676 52753714 Gma16g00202 16 2151344 2153631 ECH
Gma19g02426 19 52751676 52753714 Gma03g02380 03 48931401 48933319 GST
Gma19g02426 19 52751676 52753714 Gma07g00506 07 4765181 4767879 PCT
Gma19g02426 19 52751676 52753714 Gma16g00202 16 2151344 2153631 PCT
Gma07g00506 07 4765181 4767879 Gma19g02426 19 52751676 52753714 PCT
Gma16g00202 16 2151344 2153631 Gma19g02426 19 52751676 52753714 PCT