Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01897 ATGATGGAGAAATGGTGGAAGGCTAATAATGTTGAGATTTCACCAAATTGTCCTAGGTGTGGTTCTACCAATACCAAGTTCTGCTACTACAATAACTACAGTTCAACTCAACCACGGTACTTTTGCAAGGGCTGCAGAAGATACTGGACCAAAGGAGGATCCCTCCGCAACGTGCCGGTTGGTGGTGGCTGCCGCAAAAGTAGAAGCGCTAAGTATAATAAGACCTTCAGACAAGCCAATAACTCAGTTGGCTATTCTGATGATTTAATGGCCTCACCTAATTCAGTGGTGTCAGATGCTCCAAGTATTGATCTAGCACAAGTTTATGCGAGTTTTCTCAACCAGAAGCCAGATCAAGCCGTCCAAACAGTTCGCTATCCTAACGAACCAGATTATTATTCATGCCTATTGAACACTACTGATTTTGGCCATAGTGCTCTCTCTGAAGAAGAACTTGGTCTCACTGATTGTTTGCATTTTCATGAACAATCCACAGAATCACATTTCGGTGAGAGTTTCCAAATGTATCTTTTCGGGTTCAACTCTATCCATAATCATCAAGAATATTACAGTAGCAGTTATGATACCACAAATAATACAAATTTTGAGTTGCCACCGTTGCCTGGTGAAGAGACAGAAATCTCACACGGTGATATGTTGTGGTCCAAATCCAATTCTGAGATGATGCTCGATCATGCTTTGCAAGCCTCCCAACCGCCCCTTTTTGGACCTCAATCTCATGATGCAGACTTCATTATGGGAAATTGTTGGAGCCACTTCGATTTGCCAAGGGATGCTTCTTTTTCCACGCTTTGA 816 0.4252 MMEKWWKANNVEISPNCPRCGSTNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRSAKYNKTFRQANNSVGYSDDLMASPNSVVSDAPSIDLAQVYASFLNQKPDQAVQTVRYPNEPDYYSCLLNTTDFGHSALSEEELGLTDCLHFHEQSTESHFGESFQMYLFGFNSIHNHQEYYSSSYDTTNNTNFELPPLPGEETEISHGDMLWSKSNSEMMLDHALQASQPPLFGPQSHDADFIMGNCWSHFDLPRDASFSTL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01897 271 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 267 IPR045174 GO:0003700|GO:0006355
Gma19g01897 271 Pfam Dof domain, zinc finger 16 69 IPR003851 GO:0003677|GO:0006355
Gma19g01897 271 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Gma19g01897 271 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Gma19g01897 271 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01897 Gma-Chr19 48140269 48141084 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01897 6 266 C2C2-Dof Transcription Factor Family AT3G52440 40.000 3.34e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma19g01897 zf-Dof 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01897 - - gmx:100812522 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01897 19 48140269 48141084 Gma19g01897 19 48140269 48141084 ECH