Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01030 ATGACATGTAAGAGATATTGGACAAAAGGTAGGGCTTTGCACAATGTCCCTATTGGCGGTGGATGCAGAAAGAATAAAAAGGTGAAGTCATCAAGGCTCTCATGTGATTCCAAAGACTCTGGCTCCTCTTTTTCAGAACTTGGTGGCCTCAAATTCCTTCATTCTCTTTCTCTTTCCATGAACTTTCACCTTGGAGGGTTACCCTTCCCTAGGCTTCACCATCATCATCCTCCAACCACTTACAACCATTTCTTCTCTTTTGGAGACACTTCTAATGCTTCTTCATGTTTCAACCTTGACCCTTCTCCTGGAACTACCCTATCACATTCTTTTGTTGTTGTCAATAATAACCCTTTTCTTACAATGGTGCAATCCAAGGTGGTTGAGAAACCAGATGTTGTTGATTTAGACCATGTTACAGGGGACCTGAAATTCTGTGATGTTTCCTTTGGGTACATCGATGACGTGCCACTTGTTTTAAATGCATTAAATCTTCACATTAGAATTGGAGAGATAGTTGTTATTATGGGTCCTTCTGGTGGAGGGAAAACAACACTTGTAAAATTGTTGCTTTGGCTTTATGATCCTATATATGGTTGTATACTGATTCATAACCATAACATCCAAAACATTTGA 636 0.3962 MTCKRYWTKGRALHNVPIGGGCRKNKKVKSSRLSCDSKDSGSSFSELGGLKFLHSLSLSMNFHLGGLPFPRLHHHHPPTTYNHFFSFGDTSNASSCFNLDPSPGTTLSHSFVVVNNNPFLTMVQSKVVEKPDVVDLDHVTGDLKFCDVSFGYIDDVPLVLNALNLHIRIGEIVVIMGPSGGGKTTLVKLLLWLYDPIYGCILIHNHNIQNI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01030 211 Pfam Dof domain, zinc finger 2 27 IPR003851 GO:0003677|GO:0006355
Gma19g01030 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 210 IPR027417 -
Gma19g01030 211 Pfam ABC transporter 160 210 IPR003439 GO:0005524
Gma19g01030 211 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 120 211 IPR039421 -
Gma19g01030 211 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 120 211 - -
Gma19g01030 211 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gma19g01030 211 Gene3D - 141 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01030 Gma-Chr19 37955969 37958154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01030 2 29 C2C2-Dof Transcription Factor Family AT2G37590 67.857 1.41e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma19g01030 ABC_tran 4.7e-10 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01030 K02021 - gmx:100780729 194.897