Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02604 ATGGATAATTATGGATCATCTTCTCCATACCGGTATCCAAACCAATATATGTACCCTCCCAATCCTCACCAACCGTACCCTCCTCCTCCAGGTTCAGCTCCTGATCCATATGCACAACATGTTCCTTATCAACCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCCTATCCTCCACCTCCTAGATCTTCCTCACATTCTGGCCATTTTGAGTATTCCTATCCCCCTCCTCACCCTCCACCATCTTATGCTAATCCTCCTTACCCTTATCCCTACCATGTTCCTCCACCAAATCATGATCCTCCCAAGCCTTCCCTTTCACACCATGCTAGTTTCCAACATGAACCATCTCATTATTATTATCAACAACCAAACGACGCCTATTCAGCTTCAGCTCCTCAAGTCCATCCTGATGTCCATTTGCGCACCAACAGCTTCTCTGGTCCCTACTGGCATGAGAACACTAGCACTGCAGGAGATGAAGTGTCACAAACTAGTGACAATTCCAAGCCTTCTCAGGGTTCTGCTTACCCGTCTTTGGATGATCTTATGAGTAATGTTCGATTGTCTGATGACCAGCCAACTGCTCCTGCATCACCACCTGCGCCTGCAGGGCAACCATTTATGCATTCCATTTCAGTTCCAAAGTTGCAACAGAAGAGAGAGGAGTTTTATGGATATTCGAATAACTCCTTCTCGGGGTGGGGATCCTCCTACCACAGTCGGGTGGATTCGTCTAGACTTTCAGATTTTTCTGGCTCATTTAATGAATCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTCCATGAAGCCAAGAATCTTCCAAATATGGACATGTTTCACAAAACATTAGGAGATATGTTTGGTAAATTACCAGGCAGTGTGGGCAACAAAATTGAAGGAACTATGAATAAGAAGATTACTAGTGATCCTTATGTATCAATTTCAGTATCCAATGCTGTAATTGGGAGGACTTACGTCATTAGCAACTCTGAAAATCCTGTTTGGTTGCAGCATTTCTATGTTCCTGTTGCATATCATGCTGCTGAAGTGCACTTTCTTGTTAAAGACAGTGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGAAAATATACTCAGGAGAAGTAGTTGAAGGAACCTTCCCTATCCTGAATAATAATGGGAAGCCTTGTAAGCAAGGTGCTGTCCTTACCCTATCCATTCAGTACATACCTATGGAGAAATTGAGCATTTATCACCAAGGAGTTGGAGCAGGGCCAGAATACATTGGGGTTCCCGGCACATATTTTCCTTTGAGGAGGGGTGGAACCGTTACTCTGTATCAAGATGCTCATGTTCCAGATGGCAGCCTCCCTAATGTGTTGCTTGACAGTGGAATGTATTATGTGAATGGAAAGTGTTGGCAAGATATCTTTGATTCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTAAGGTTGGTTAGGGATGCTGCTGGTTATGCTTCAGATTATACATTGGGTGATCTTCTAAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATCTGGGATGATCCTACATCAAGAAGCATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAGACTCGTAGATTTTTTAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGCAGTGGCAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTGATTGTGGATGCTGACGCCGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTTTTTAGAACATTGAATACAATACATAAGGATGACTACCACAACCCTACTTTCACGGGCAATGCTGGAGGTTGTCCACGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCACGGGATTAAAAAGTTGAAAATTTCAGATGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATGATCCTGAAGTTTGGCATGCTCAGatatttcgttcaattgattcaaattccgttaagaggtttccaaaggatccaaaagatgcaacaagcaagaacctagtatgtggaaagaatgtgctgattgacatgagcatacatacagcatatgttaagaccattcgtgctgcacaacattacatttatatagagaatcaatatttcattggctcttcatacaattggagtcaacataaagacctaggtgctaataacttaatcccaatggaaattgctctaaagattgctgaaaagataaaagcaaatgagagatttgcagtgtatgttgttattccaatgtggccagaaggtgttccaacaggggctgccacacaaaggattctattttggcagaataaaacaatgcaaatgatgtatgagacaatttacaaggctttggttgaggcagggcttgaagcagcattttctccacaagattatttgaactttttctgtcttggtaatcgagaggccgggaatttgtatgataatgtcagcatgaccggagctcctcccccagcaaatagtccacaagcagccagcagaaatagccaacgcttcatgatttatgttcattctaaaggcatgatagttgatgatgaatatgtgatattggggtctgcaaacatcaaccagcgctccatggaaggaacaagggacagtgagattgcaatgggagcctatcaacctcatcatacttgggcaagaaaacaatcttatccacatggacaaatccatggatataggatgtcactttgggcagaacatacaggaacaattgaagagtgctttttgaaaccggagagccttgaatgtAGACCAAGTGCAGCAATTTCAGGCACATCAGCAACTACCATTTGGTTCTCACCATTGTTTTGTCCTCCAACATATTCCTCATAG 3168 0.316 MDNYGSSSPYRYPNQYMYPPNPHQPYPPPPGSAPDPYAQHVPYQPYPYLSSHSFNYSYPPPPRSSSHSGHFEYSYPPPHPPPSYANPPYPYPYHVPPPNHDPPKPSLSHHASFQHEPSHYYYQQPNDAYSASAPQVHPDVHLRTNSFSGPYWHENTSTAGDEVSQTSDNSKPSQGSAYPSLDDLMSNVRLSDDQPTAPASPPAPAGQPFMHSISVPKLQQKREEFYGYSNNSFSGWGSSYHSRVDSSRLSDFSGSFNESVHSQSLQIVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVGNKIEGTMNKKITSDPYVSISVSNAVIGRTYVISNSENPVWLQHFYVPVAYHAAEVHFLVKDSDIVGSQLIGIVAIPVEKIYSGEVVEGTFPILNNNGKPCKQGAVLTLSIQYIPMEKLSIYHQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGSLPNVLLDSGMYYVNGKCWQDIFDSISQARRLIYITGWSVWHKVRLVRDAAGYASDYTLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTIHKDDYHNPTFTGNAGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISDDDALLRLERIPDVIGINDAPSVGEDDPEVWHAQIFRSIDSNSVKRFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKTIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAGNLYDNVSMTGAPPPANSPQAASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEECFLKPESLECRPSAAISGTSATTIWFSPLFCPPTYSS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02604 1055 MobiDBLite consensus disorder prediction 111 131 - -
Gma18g02604 1055 SMART C2_3c 284 406 IPR000008 -
Gma18g02604 1055 MobiDBLite consensus disorder prediction 57 71 - -
Gma18g02604 1055 MobiDBLite consensus disorder prediction 15 36 - -
Gma18g02604 1055 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 608 643 IPR001736 GO:0003824
Gma18g02604 1055 MobiDBLite consensus disorder prediction 148 194 - -
Gma18g02604 1055 Pfam Phospholipase D Active site motif 609 643 IPR001736 GO:0003824
Gma18g02604 1055 Pfam Phospholipase D Active site motif 944 970 IPR001736 GO:0003824
Gma18g02604 1055 PANTHER PHOSPHOLIPASE D 181 1028 IPR015679 -
Gma18g02604 1055 MobiDBLite consensus disorder prediction 74 104 - -
Gma18g02604 1055 SMART pld_4 608 643 IPR001736 GO:0003824
Gma18g02604 1055 SMART pld_4 943 970 IPR001736 GO:0003824
Gma18g02604 1055 Gene3D Endonuclease Chain A 486 723 - -
Gma18g02604 1055 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 943 970 IPR001736 GO:0003824
Gma18g02604 1055 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 432 IPR035892 -
Gma18g02604 1055 MobiDBLite consensus disorder prediction 57 210 - -
Gma18g02604 1055 ProSiteProfiles C2 domain profile. 261 407 IPR000008 -
Gma18g02604 1055 Pfam C2 domain 283 409 IPR000008 -
Gma18g02604 1055 SUPERFAMILY Phospholipase D/nuclease 777 1029 - -
Gma18g02604 1055 PANTHER PHOSPHOLIPASE D ALPHA 1 181 1028 - -
Gma18g02604 1055 MobiDBLite consensus disorder prediction 1 44 - -
Gma18g02604 1055 Gene3D C2 domain 278 422 IPR035892 -
Gma18g02604 1055 SUPERFAMILY Phospholipase D/nuclease 487 708 - -
Gma18g02604 1055 CDD C2_plant_PLD 278 430 - -
Gma18g02604 1055 Gene3D Endonuclease Chain A 754 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02604 Gma-Chr18 60158484 60166287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02604 44 1028 Phospholipase D Gene Family (Wang group) AT2G42010 66.959 0.0 1333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02604 18 60158484 60166287 Gma08g02439 08 27550300 27551485 GST