Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02536 ATGTTCCCTTCCACTAATTATACCTCCTCAGGCTCTTACCCTCGTTTCCCTTCATCTTCTTCTTCCACTTCACCCTATCCTTCTTTTACTCTCCTTCATCCTGAAAATTCTTCTTCCAGCAACAACACCTTTCTTCATGATCCACTTGCTCTTACCTACATACCCTCTCATTACCATGCTCCAATCCCAGAAACACTAGCCAATTGGGCAGTTGCAGATTGTGCAATACTGAATCAGGATCTAGGTGGTGCCCTTTATGGCATCACCAAGAAACCAATGAAGAAAGCAACTAAGAAAGACAGGCACAGCAAGATTCATACTTCTCAGGGTTTGAGGGACAGAAGGGTTAGGCTTTCCATTGAGATCGCACGCAAGTTCTTTGATCTTCAAGATATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCCAAGAAGGCAATTAAGGAGCTTACTCGAAGCAAGCACAGTGTTGAAAGCTTCGAGTTCTCCTCATCTTCCGAGGGTGAAGTAGTTTCTACTATCCAGCAACAAGACCTACAACAACAACATGGGATAAATTTGGAAAATGGGAAGTTGAAAGAACCTGCAGCTTATTGTGTTAAAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAAGACTAGTAGCAAGGTATTGTGCAACACAAGTGGCGAAGGGAAGGTGCAAGAGTTGAAGAAAAAGTGCCCTGCAACTGAAAACCCTCAAATCCTGAACCAGTTAAGGTCAACCCTTCAACCTCCTCATCCTCAAAATGTGGGTGGAGAAGTGCCAAGAGATGATGACTTCAACGTTATTGAGGAATCCATTGTCATCAGAAGAAAGTTGAAACACACTTTGATGTCTTCCAATATTCATCATCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTAAACAACAGTGACTACCACTCCTTCCCCAATTTGTCTCCAAATTGGGAAGCTAATAATGGTGCCAATGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTGTCTACAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCAAGCTAA 1113 0.4349 MFPSTNYTSSGSYPRFPSSSSSTSPYPSFTLLHPENSSSSNNTFLHDPLALTYIPSHYHAPIPETLANWAVADCAILNQDLGGALYGITKKPMKKATKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVESFEFSSSSEGEVVSTIQQQDLQQQHGINLENGKLKEPAAYCVKAKMKESREKARARAREKTSSKVLCNTSGEGKVQELKKKCPATENPQILNQLRSTLQPPHPQNVGGEVPRDDDFNVIEESIVIRRKLKHTLMSSNIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANNGANGRSTFCAIASMNLSTGLQIFGKSWEECTNPHPS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02536 370 ProSiteProfiles TCP domain profile. 98 156 IPR017887 -
Gma18g02536 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 369 IPR005333 GO:0003700
Gma18g02536 370 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 8 369 - -
Gma18g02536 370 ProSiteProfiles R domain profile. 211 228 IPR017888 -
Gma18g02536 370 MobiDBLite consensus disorder prediction 1 21 - -
Gma18g02536 370 Pfam TCP family transcription factor 97 228 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02536 Gma-Chr18 59448496 59450095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02536 44 270 TCP Transcription Factor Family AT1G67260 37.288 1.49e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma18g02536 TCP 9e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02536 18 59448496 59450095 Gma08g02386 08 23459544 23460769 GST