Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00578 ATGATATTTGCAAATCCGTCGCTATTCACTACAAGACCCGTCCCTCCGACACCCTCCTCCATCGTCGACGTCGTCTACGCCGGCCTCGTCTCCTTCGACCAGCTCCGCGAGGTTAACTCCATTTCCGACCCTGATGTGGGCCAAAATCTCATCGTTCCTCTTCCTTGCACCTGCTTCAACGGCTCCGATAACTCTCTCCCTGCGATTTACCTCTCTTATGCTGTTCGCCCCGTTGATACCCTCGTTGTCATTGCTGCTAGGTACTTCATCACTCTCACTGATTCGATGAATGTTAATGCCATGGGAAGCAGTGCTATCAACATGAATGCAACCGGACCATATTGA 345 0.513 MIFANPSLFTTRPVPPTPSSIVDVVYAGLVSFDQLREVNSISDPDVGQNLIVPLPCTCFNGSDNSLPAIYLSYAVRPVDTLVVIAARYFITLTDSMNVNAMGSSAINMNATGPY 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00578 114 Pfam LysM domain 73 105 IPR018392 -
Gma18g00578 114 Pfam LysM domain 30 53 IPR018392 -
Gma18g00578 114 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 17 107 - -
Gma18g00578 114 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 17 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00578 Gma-Chr18 5659601 5661480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00578 9 103 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 60.204 2.35e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00578 - - gsj:114378675 156.762