Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00411 ATGGTTCTCTCCAAAACCGCCTCCGAATCCGACGTCTCTGTCCACTCAACCTTCGCTTCTCGCTATGTCAGAACTTCGCTTCCCAGGTTCAAGATGGCGGAGGAGTCGATACCGAAGGAGGCAGCATACCAGATCATAAACGACGAGTTGATGTTGGATGGGAACCCAAGGTTGAATTTGGCATCATTTGTGACGACTTGGATGGAGCCAGAGTGTGATAAACTCATCATGGCTGCCATTAATAAGAACTATGTTGACATGGACGAGTACCCTGTCACCACTGAGCTACAGAATCGATGTGTTAACATGATAGCTCATCTTTTCAATGCACCACTAGAAGAGACTGAGGCAGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATTATGTTGGCTGGATTGGCATTCAAAAGAAAGTGGCAAAACAGAAGGAAACAAGAGGGAAAGCCTTATGACAAACCCAACATTGTCACTGGAGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTAAAGGAGGTGAAGCTCCGTGATGATTATTATGTAATGGACCCTGAAAAGGCCGTGGAATTGGTGGATGAGAACACTATTTGTGTTGCTGCTATCCTTGGTTCCACACTAAATGGAGAGTTTGAAGATGTCAAACGCTTAAATGATCTCCTAATTGAAAAGAACAAAATAACTGGGTGGGACACTCCTATTCATGTTGATGCAGCCAGCGGTGGGTTCATAGCCCCATTTATTTACCCAGAGCTTGAGTGGGACTTCCGGTTACAACTAGTGAAGAGCATCAATGTTAGTGGGCACAAGTATGGTTTGGTCTATGCTGGAATCGGTTGGGTTATCTGGAGAAGCAAGCAGGACTTGCCTGAGGAACTCATCTTTCACATCAACTATCTTGGGGCTGATCAACCCACCTTCACCCTTAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATACTACCAACTGATTCGCCTTGGTTTTGAGGGATATAGAAACGTGATGGAAAACTGCAGGGACAACATGCTGGTGCTGAAAGAGGGACTCGAGAAAACAGGGCGATTTTCAATTGTGTCCAAAGACAATGGTGTGCCTTTGGTGGCTTTCACACTGAAAGACCACACCCACTTTGACGAATTCCAAATCTCAGACTTTTTAAGGCGCTTTGGGTGGATAGTGCCAGCATACACCATGCCCCCAGATGCTCAACATGTCACAGTGCTTCGTGTTGTCATCAGGGAGGACTTCTCAAGGACCCTCGCGGAGCGTCTCGTGTCCGATGTGGAGAAGGTGCTGCATGAGCTTGATTCACTTCCTGCAAGGGTCATCAGCAGCACCACTGTGACACTCAGTGCAGAAGAAAATGGCAAGGTAGTGGTTGCTAAGAAGAATCCTATGGAGACTCAGAGGGAAATCACTGCCATTTGGAAGAAGTTTGTGTTGGAGAGGAAGAAGAACAATGACAAGATGAATGGTGTTTGTTAG 1512 0.4663 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMAEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDDYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNKITGWDTPIHVDAASGGFIAPFIYPELEWDFRLQLVKSINVSGHKYGLVYAGIGWVIWRSKQDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCRDNMLVLKEGLEKTGRFSIVSKDNGVPLVAFTLKDHTHFDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELDSLPARVISSTTVTLSAEENGKVVVAKKNPMETQREITAIWKKFVLERKKNNDKMNGVC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00411 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma18g00411 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma18g00411 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Gma18g00411 503 CDD DOPA_deC_like 59 439 - -
Gma18g00411 503 Gene3D - 1 65 - -
Gma18g00411 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma18g00411 503 Gene3D - 66 360 IPR015421 GO:0003824
Gma18g00411 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
Gma18g00411 503 Gene3D - 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00411 Gma-Chr18 3748756 3759371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00411 1 503 Calmodulin-binding Proteins AT2G02010 83.698 0.0 875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00411 18 3748756 3759371 Gma18g00411 18 3748756 3759371 ECH
Gma18g00411 18 3748756 3759371 Gma11g02158 11 36621468 36630614 GST
Gma18g00411 18 3748756 3759371 Gma02g02282 02 48894805 48901601 PCT
Gma02g02282 02 48894805 48901601 Gma18g00411 18 3748756 3759371 PCT