Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00376 ATGAAGAGGGATCACCGAGATAGCTGCGGCGGCGGCGGCGGAGGGAGTGTGAAGGGTGAGTGTTCCTCAATGCCGTCGAACGGGAAGGCAAATATGTGGGAGGAACAACAACAACAACAACAGGGGATGGACGAGTTGCTGGCGGCGTTGGGGTACAAGGTTCGTGCTTCCGACATGGCCGACGTGGCACAGAAGCTGGAGCAGTTGGAGATGGTCATGGGTTGTGCCCAGGAAGAGGGAATTTCCCACCTCGCCTCCGACACCGTCCACTACGATCCCACGGATCTTTATTCCTGGGTCCAAACCATGTTAACCGAACTCAACCCTGAACCCAACAACAACAACAATAGCCTCCTCGGTCCATCTTCTCTCTTAATCGACAACAACACCGCCCCTGTTTTCAACGACGATTCCGAATATGACCTCAGAGCCATTCCTGGTATTGCAGCCTACCCTCCTCCTCCTCCACAAGACAACAACAACAACAACAACAACCTCGACGAAATCGAAACAGCTAACAACATCAACAAGCGTCTCAAGCCATCTCCAGTTGAATCAGCAGACTCCGCGTCTGAGCCCACGCGCACGGTGCTGCTCGTTGACCATCAGGAAGCCGGCGTGCGTCTGGTCCACACTCTCCTGGCGTGCGCGGAGGCCGTCCAGCAGGAGAATCTGAAGCTGGCCGACGCGCTCGTCAAGCACGTGGGCATACTCGCGGCTTCTCAAGCCGGCGCCATGAGGAAGGTGGCTTCCTACTTCGCCCAAGCCCTCGCGCGTCGTATCTACGGAATCTTCCCGGAAGAAACCCTCGACTCCTCCTTCTCCGACGTTCTCCACATGCACTTCTACGAGTCCTGCCCTTACCTCAAATTCGCGCACTTCACCGCGAATCAGGCTATCCTCGAAGCATTTGCCACTGCTGGGAGAGTCCACGTCATCGATTTCGGCCTCAGACAAGGGATGCAGTGGCCTGCACTCATGCAAGCCCTTGCATTGCGGCCCGGCGGGCCCCCGACTTTCCGTCTAACCGGAATCGGCCCGCCGCAGCCCGACAACACCGACGCGCTGCAGCAAGTGGGCTGGAAATTAGCCCAATTGGCCCAGAACATCGGCGTCCAGTTCGAATTCCGCGGCTTCGTTTGCAACAGCCTCGCGGATCTCGACCCGAAAATGCTCGAGATCCGACCCGGAGAAGCCGTCGCTGTCAACTCGGTTTTCGAGCTCCATCGTATGCTGGCCCGCCCCGGATCCGTCGACAAGGTCTTGGACACTGTTAAGAAAATCAAGCCGAAGATTGTCACCATCGTGGAACAAGAAGCGAACCACAACGGACCGGGTTTTCTTGACCGGTTCACTGAGGCCTTGCATTACTACTCCAGCCTATTCGACTCGCTGGAGGGTTCGTCCTCTTCGACCGGGTTGGGCTCACCAAATCAGGATCTGTTAATGTCCGAGTTGTACCTGGGGAGACAAATATGCAACGTGGTGGCTAACGAGGGCGCGGACCGGGTAGAGCGTCACGAGACTTTGAGTCAGTGGAGGGGGAGATTGGACTCGGCCGGGTTCGACCCGGTTCATCTCGGGTCCAACGCGTTCAAGCAAGCGAGTATGCTACTTGCTCTATTCGCAGGCGGTGACGGCTATAGGGTTGAGGAGAATAACGGCTGCCTCATGCTTGGCTGGCACACTCGGCCACTCATCGCTACCTCCGCCTGGAAGCTTCCCTCCCCGAACGACTTGCACTGTAAACTGTAG 1755 0.5715 MKRDHRDSCGGGGGGSVKGECSSMPSNGKANMWEEQQQQQQGMDELLAALGYKVRASDMADVAQKLEQLEMVMGCAQEEGISHLASDTVHYDPTDLYSWVQTMLTELNPEPNNNNNSLLGPSSLLIDNNTAPVFNDDSEYDLRAIPGIAAYPPPPPQDNNNNNNNLDEIETANNINKRLKPSPVESADSASEPTRTVLLVDHQEAGVRLVHTLLACAEAVQQENLKLADALVKHVGILAASQAGAMRKVASYFAQALARRIYGIFPEETLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLRQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQNIGVQFEFRGFVCNSLADLDPKMLEIRPGEAVAVNSVFELHRMLARPGSVDKVLDTVKKIKPKIVTIVEQEANHNGPGFLDRFTEALHYYSSLFDSLEGSSSSTGLGSPNQDLLMSELYLGRQICNVVANEGADRVERHETLSQWRGRLDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSPNDLHCKL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00376 584 Coils Coil 59 79 - -
Gma18g00376 584 SMART DELLA_2 44 117 - -
Gma18g00376 584 Pfam GRAS domain family 209 573 IPR005202 -
Gma18g00376 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 573 IPR005202 -
Gma18g00376 584 Pfam Transcriptional regulator DELLA protein N terminal 44 111 IPR021914 -
Gma18g00376 584 MobiDBLite consensus disorder prediction 1 28 - -
Gma18g00376 584 Gene3D - 42 107 IPR038088 -
Gma18g00376 584 PANTHER DELLA PROTEIN RGL1 38 573 IPR030006 GO:0003712|GO:0005634
Gma18g00376 584 ProSiteProfiles GRAS family profile. 200 573 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00376 Gma-Chr18 3316429 3318586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00376 15 574 GRAS Transcription Factor Family AT3G03450 63.316 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma18g00376 GRAS 1.7e-138 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00376 18 3316429 3318586 Gma18g00376 18 3316429 3318586 ECH
Gma18g00376 18 3316429 3318586 Gma11g02193 11 37130863 37132650 GST