Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00373 ATGGAGAACTTGTTGGGTCTGCTGAGAATTCATGTTGAAAAAGGTGTCAATCTTGCCATCAGGGATGTGGTGAGCAGTGACCCTTATGTTGTCATCAAAATGGGAAGGCAGAAGCTGAAGACTCGGGTAGTCAAGAAGAATCTAAATCCTGAATGGAATGATGACTTGACCTTGTCTATTTCAGACCCTCATGCTCCAATTCATCTACATGTGTATGACAAGGACACATTTAGCATGGATGACAAAATGGGGGATGCTGAGTTTTTCATAGGTCCATTTATTGAAGCAGTGAAGATGCGCTTGTCAGGTCTCCCCAACAATACTATAGTTACAAAAGTGCTACCTAGCAGACAAAACTGTTTAGCTGAAGAGAGTCACATAATGTTGAAGGATGGCAAGGTTGTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAGAGTGGGGAAGTGGAGCTCCAGTTGCATTGGATTGACATTCCTGGTTCAAGACATCTCTAG 498 0.4237 MENLLGLLRIHVEKGVNLAIRDVVSSDPYVVIKMGRQKLKTRVVKKNLNPEWNDDLTLSISDPHAPIHLHVYDKDTFSMDDKMGDAEFFIGPFIEAVKMRLSGLPNNTIVTKVLPSRQNCLAEESHIMLKDGKVVQNMVLRLRNVESGEVELQLHWIDIPGSRHL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00373 165 CDD C2_ArfGAP 5 148 - -
Gma18g00373 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Gma18g00373 165 SMART C2_3c 7 102 IPR000008 -
Gma18g00373 165 Pfam C2 domain 6 89 IPR000008 -
Gma18g00373 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Gma18g00373 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Gma18g00373 165 Gene3D C2 domain 4 161 IPR035892 -
Gma18g00373 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00373 Gma-Chr18 3268002 3270583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00373 38 165 C2H2 Transcription Factor Family AT1G70790 56.923 7.72e-48 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00373 18 3268002 3270583 Gma18g00373 18 3268002 3270583 ECH
Gma18g00373 18 3268002 3270583 Gma07g00918 07 10086115 10088104 ECH
Gma18g00373 18 3268002 3270583 Gma09g01639 09 41870211 41872006 ECH
Gma18g00373 18 3268002 3270583 Gma11g02197 11 37201072 37203423 GST