Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02502 ATGGAGAAGCCAGGAGGAGGAGGAGTGTTATCGGCGAAGGAGGCATTCGAGAAGCTTGAAAAGGTGGGAGAAGGGACATATGGGAAGGTGTACAGAGCAAGAGAGAAGGCCACGGGGAAGATCGTGGCTCTGAAGAAGACTCGTCTCCACGAGGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTCTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAAACTGGACAAACCGTTCCACCCCAAACCATCAAAAGCTTGATGTACCAGCTTTGCAAGGGCGTTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAACCTCACAATCTCTTGATGGACCCAAAAACCATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGAGCATTTACTGTGCCGATTAAGAAATATACACATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCGGTGGACATTTGGTCCGTAGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCACTCTTTCCTGGTGATTCCGAACTGCAACAACTCCTGCATATATTCAGGCTATTGGGTACTCCCAACGAAGACGTGTGGCCAGGCGTGAGTAAACTAATGAACTGGCATGAATACCCTCAATGGAACCCTCAAAGTCTGTCAACGGCTGTTCCAAGTTTGGATGAGCTTGGACTGGATTTGCTATCTCAAATGTTGAAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTTGATGACTTGGACAAGAGGCACCTTTAG 945 0.4783 MEKPGGGGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQTVPPQTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDPKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEDVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGLDLLSQMLKYEPSKRISAKKAMEHAYFDDLDKRHL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02502 314 Gene3D Phosphorylase Kinase; domain 1 11 102 - -
Gma17g02502 314 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gma17g02502 314 SMART serkin_6 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02502 314 Pfam Protein kinase domain 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02502 314 PANTHER CELL DIVISION PROTEIN KINASE 11 312 - -
Gma17g02502 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gma17g02502 314 ProSiteProfiles Protein kinase domain profile. 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g02502 314 SUPERFAMILY Protein kinase-like (PK-like) 14 309 IPR011009 -
Gma17g02502 314 Gene3D Transferase(Phosphotransferase) domain 1 104 313 - -
Gma17g02502 314 PANTHER - 11 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02502 Gma-Chr17 43023675 43025199 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gma17g02502 Pkinase 5.3e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02502 17 43023675 43025199 Gma17g02502 17 43023675 43025199 ECH
Gma17g02502 17 43023675 43025199 Gma14g02187 14 53016015 53018205 GST