Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02488 ATGGATGGGGGTGGGGCTTTTGGAGAGCTTTCCTTGTCACATGCGAAACAGCAAAACTTTAAAAGGGAACAGCGATCTTCTCAATCAAATGCAAACAACCTTTCCTTTCCTTATTCTCTACCAACGCCAACAAACATGCTCGGTTCCGTTCTTCTGGCGGTTTTCTTGCCGTGCATCGGCATGAGCGCCGCTTTGATCGTGTACATGTGCCTTCTCTACTACTTCACCGACCACTTCTCCGACCCCGCGCTACCGGCCAAGCCAGCCTCCGACAGCGGGCTCTCCCCTTCCCAGCTCGACAAGCTACCCAGAATCACCGGAAAGGAACTTGTGATGGGAAACGAATGCGCCGTCTGCCTGGACCATATCGGAACAGAGCAACCGGCTCGGCTGGTTCCCGGTTGCAACCACGCCTTCCATTTGGAATGCGCCGACACCTGGCTCTCCGAGCACCCTCTCTGCCCTCTCTGCAGAGCCAAACTCGACCCAGCGCTTTTCTCTTCCTCCCAAAATCCATGCTGA 522 0.5498 MDGGGAFGELSLSHAKQQNFKREQRSSQSNANNLSFPYSLPTPTNMLGSVLLAVFLPCIGMSAALIVYMCLLYYFTDHFSDPALPAKPASDSGLSPSQLDKLPRITGKELVMGNECAVCLDHIGTEQPARLVPGCNHAFHLECADTWLSEHPLCPLCRAKLDPALFSSSQNPC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02488 173 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 46 173 - -
Gma17g02488 173 SUPERFAMILY RING/U-box 101 164 - -
Gma17g02488 173 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 46 173 - -
Gma17g02488 173 SMART ring_2 116 157 IPR001841 -
Gma17g02488 173 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Gma17g02488 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 164 IPR013083 -
Gma17g02488 173 Pfam Ring finger domain 114 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02488 Gma-Chr17 42910480 42911001 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02488 17 42910480 42911001 Gma17g02488 17 42910480 42911001 ECH
Gma17g02488 17 42910480 42911001 Gma14g02162 14 52765941 52767120 GST
Gma17g02488 17 42910480 42911001 Gma04g00199 04 1703267 1704416 PCT
Gma17g02488 17 42910480 42911001 Gma06g00188 06 1643408 1643800 PCT
Gma04g00199 04 1703267 1704416 Gma17g02488 17 42910480 42911001 PCT
Gma06g00188 06 1643408 1643800 Gma17g02488 17 42910480 42911001 PCT