Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02454 ATGGAAATTGAAGAGCAAACGATGAAAATGATGATGAAGTCGTCGTCTAGGTTCAGACGTATCTGTGTTTTCTGTGGCACCAGCCCTGGCAAGAACCCCAGCTACCAACTCGCTGCCATCCAACTCGCCAAACAACTTGTGGAGAGGAACATCGACTTGGTTTATGGAGGAGGGAGCATTGGGTTGATGGGTTTAATCTCACAAGTTGTGTTTGATGGTGGACGCCACGTGTTAGGGGTGATTCCAACAACTCTTATGCCAAGAGAGATAACGGGGGAAAGTGTCGGAGAAGTGAGAGCAGTGTCAGGCATGCACCAACGCAAGGCAGAAATGGCGAGACAAGCCGATGCATTTATTGCGCTGCCAGGTGGATATGGCACCCTGGAAGAACTACTTGAAGTGATCACCTGGGCTCAACTAGGAATCCACGATAAACCCGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGTTGCTGTCATTCATGGACAATGCTGTAGACGAAGGTTTCATTACACCCGCTGCCCGTCACATTATTGTCTCTGCCCAAACTGCCCAAGATCTCATGTGCAAGCTTGAGGAATATGTCCCGAAGCACTGTGGCGTGGCACCAAAGCAAAGTTGGGAGATGAACCAACAGTTATAA 648 0.4923 MEIEEQTMKMMMKSSSRFRRICVFCGTSPGKNPSYQLAAIQLAKQLVERNIDLVYGGGSIGLMGLISQVVFDGGRHVLGVIPTTLMPREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFMDNAVDEGFITPAARHIIVSAQTAQDLMCKLEEYVPKHCGVAPKQSWEMNQQL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02454 215 Gene3D - 7 195 - -
Gma17g02454 215 SUPERFAMILY MCP/YpsA-like 17 196 - -
Gma17g02454 215 Coils Coil 212 215 - -
Gma17g02454 215 PANTHER LOG FAMILY PROTEIN YJL055W 11 213 - -
Gma17g02454 215 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 11 213 - -
Gma17g02454 215 Pfam Possible lysine decarboxylase 63 192 IPR031100 -
Gma17g02454 215 TIGRFAM TIGR00730: TIGR00730 family protein 20 196 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02454 Gma-Chr17 42576140 42580815 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02454 17 42576140 42580815 Gma17g02454 17 42576140 42580815 ECH
Gma17g02454 17 42576140 42580815 Gma14g02125 14 52423849 52429057 GST
Gma17g02454 17 42576140 42580815 Gma04g00237 04 2031737 2034696 PCT
Gma17g02454 17 42576140 42580815 Gma06g00219 06 1921677 1924575 PCT
Gma04g00237 04 2031737 2034696 Gma17g02454 17 42576140 42580815 PCT
Gma06g00219 06 1921677 1924575 Gma17g02454 17 42576140 42580815 PCT