Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02442 ATGGAGGGGGAGAATATTAGGTCTGGGACAAAGAAGAAGCGATCCAAGAAGGAAATTGGTTTCGACTCCGACGACGACGAGCCCATTGGGTCAATGTTTAAGTTGAAGAGGTCCAAGAAGAAGGGTAGTGGTGGCGGCAGTAGTGATGCTGCTGTTGTTAGGGAGAAAGAGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGGCTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTCACAAGAGGAGGAGCAATTCCTGCTTTGCATGTGTCTGATGAAGATTTGGTTGCTTTGGGACCTAAAGGTAAGGATGAGAAAGGCGTGGCGCCCGTGCCCTTGGTGTGGGGTGATGAGGACATGCAGATGCAAGATTGCACTGATCAACAACACATGGAGGATTTGTTGCCCGTGATTTTCAATAAGGCACAGTCTAGTTCTTCTAGGAAATCTCGTAGCCAGGGTTCGAGGCAGAAAAAGGGGATTCAGAATGTAGATAGTGAAGGTTTTGTGGAAGCTGTGGATTCTGGGGTTGAAAGTAGATCTGGATCTGCTTCTGGCTCGAAATTGGTTGGGGGGAATGTTGAGTCTGTGGAACTCTTGCCTCAAGCGTCTGAACGGGTTGTTGCATCTGTGGTGGATGATCAGAAGTGTGGTGATGACTGTTTTCAAGAGGAAGCTGTGAAGGGCCATTGCGATTTGGACATTCCAGATGGACCGTCTCAGTCGAACAATGTCTGCCATGGAGATATGCAGCAATTGTCTTGTGTACAAGTTGAAGATATTTCTTGTCATTCTGACCAAAAGGTTGGATTGCAGGAAAGTGCTCTCAGTGATGCTTTAAAAAATTTATCTACCACGTCGCATGATGAAATAGTTGATACTATCTCTCTCTCAAAAGTGGGGGAGGGCGAAAGAGGATTTACTGAGGCAGGAGAGTCCGAAAACAGATTGACGGTTGAACCAGCAAAAGTGTGCAACAGTGCTTCAGAACCTGATGTTTCTACTTTTGCTGGGAAAGAAAATGTCTTAACTTCTTGCCACACTGAACCCTTGATTAAATCAGCTGAAACTATATTGAATGAGAATAATAATATGGTTGCTAGAAAAGTTTTCCAGGAATCCTCATGGAATGGAGCTCTGGATTTATCTGGATGTCATATGGAAGTAGACGGAGGTGGAAAATCAGAAACCGAGTTCGTTTCTGATAGAAATTTCTGTGATTATAGTAGTTTAGATACAAAGGCCGAAGTGCAAGATTTTGTTTCAGGTTTTTCACCTAAAAGAAATAATGTAACTGTCAGTGGTAGTTTATCTTCTATGGTGTCTAACGAAGCCAATGAAGCTGAATTGACTGCCCACTCAAATCACCCAGAGAAACCTCTAGAAGGTTGCAATATTCCAAAAGACTCAACTGCTTCAATTCTAAAATGTAGCTCAGTGTTAGATCCAATTCAATCTGATGGATCCTCTCTTCAGTCTTCTATTCCAGATGAAAATGGGAACTCTGCTGAATACCGGGCCCCTGTATCTGATTTTGCTGATAATGAGGGTAAGATATCAAGCATCCCACGGGCGGTGCGAAAGACCAAAATGCGTAAGCATGGTGACATGACATATGAGGGGGATGCTGATTGGGAAATTTTAATTGATGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGGTGACCGCACTCTTAGATCAAGATTGAAGCATGATTCCTCTTTGAATACTGGTGAAGACTCTGAAAATGTTGCAGTAGTAGCAGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATTGAGAAAATAAAGTTTAAGGAAGTCTTGAAGCGTAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTAAGTCTTTGGAACAGAGATGTCACACGTATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATACTCATTCTGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCAGAAGGAGAATGTTGGAAGTAATGCAAGGCATTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGCTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGTCAGACCAAAATGTCAGATACTTCCAATGAGATTAACAATGGTCTAACAAAGGATGGTGATGACCTAACACTTGAAGCCGCAGAAGGCATGAGGCATGCTAATGAAATGAAGACGGATTTATCAAACATGACACAACAGGTAGAAAGAAAAAAAAATGATTACCAGGGAAATGACAGTTCTGTTCCTTCTTCCAACTTTCCTGATTGCAGATTGATTTCTCTGGTAGCTAAAGAGAAAAGCAATGACTCTACCTGCATAAAATCTGCCTTAGATGCTCGGGTAGGTTATCATCTGCAGTCTGATTTAGATCCTAGGAAGAGAGTAATTGTCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTAGAACGTCAAGGATTTTCTGTTTTTGTGCTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTATTTACTGATCATTTGTCACTTTCTGTCCCTGTTGATCTTGGTGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTGATTTGTGCTCAGTTGGGTCTTGAGTTGACAGTGTTGAACAGTGATTGCCCTCTTTACGACATAGTGACAGGACAAAAAGTTCCTGCAGATATGGATGAAGCATTGGAAGCTGAGTATAATAGTCTTATTGATGACATGGTATTGGTTGTTGCTCAGAAAGGGGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATACGCTCTTAAGATTCGCCGTATGGCACGCTCTGAAAGTAGTGAAGAAACTGAACAAAATAATTCTGCAGATAGTCCATTTGATTCCAAAAAGGATAGTACTCTGGAAAAAAAACTTGGTGAGGAGATTTTGAGCCCTCAGGAAAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTTAAGGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTTGTTGAGTCTCTGGGAGAAGGACTGACAGTTCACTTGAACCATGTTGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCCAGAGTAATAAAGTCAAAGTTTCTACGGAAAATGGCAATGAGTTCTTTGGCGATGCTGTCCTTGTGACTGTTCCACTTGGCTGTTTGAAGGCTGAAACTATACAGTTCTCCCCACCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGTTTTGGAATTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACGGCTGAGGAGAGAAGCAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAGAACAGTTGGGGCTCCTGTTCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGTTTGAGCTCTTCTGATCATGTTAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGACTCAGTTCCTGATCCTGTTGCCTACGTTGTGACTGATTGGGGTAGGGATCCTTTTAGTTATGGTTCTTATTCTTACGTTGCTGTTGGAGCATCTGGAGAAGACTATGATATAATAGGGAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACATGCAAAGAGCACCCAGATACTGTCGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATGATTGACATATTGAGCAGTGGGAATGATTATATTGCAGAGGTGGAGGCATTGGAAGCTGCTCGGGGACAGTTAGACACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTTGATGCATTAGAGCTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCACATTTTAACCCGGGAAGCTTTGTTAAGGGAAATGTTCTTTAATACGAAAACCACTGCTGGGCGCTTACATGTGGCCAAACAATTGCTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGAGGCACTGTTTGCGTCTTCTTGTCCGTGTTTCGACTGATCTTCTTGCTGTACGATTATCAGgaatggggaaaaccgtgaaggaaaaagtttgTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGTCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGTAAGGGAAAAGCTTCTAATGGTGGATTGAAGATATCAAGACAAACATCTGCTGTAGATTTATCAAAGAGAAAATCTGTAAAAGATTCAGCCTTGGGAAAGCCACCTCTGGGCACATATCATGGTACCATTGAGAATAAAGGAGGCTTGCTGAATCCCACCTCTGCTGGAAGCAATTCACCTTCCACTGCACATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCAGCAGCATATGACTCAAGGCACGAGGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGACACAGTAGTTGCTGAGAAGGAGGATAACCTCTGCACTATATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAAGCTGCCCGAGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGTAATACCCTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGTGAACAGCCTTCACAAAATGACGAGTGTGATAGTAGAAAAAGATGGCCTGGTGGTGTTTATGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGGGTCAGGGACTGGTCTGTTGATTTCTCTGCTGCTTGTGTCAACCTTGATAATTCCAGAATGCCAGTTGATAACCTTTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTATTGCAATTAAAGACCATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCCAACCCATCTATTGATTTGAAGGATGAAGAGGATTCAAATGCCTGTTCGAAGTTACCCAGCTGGAAGCGTGATGGTATTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCTCAAAAAGGTCATTCACGAGGAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCTTGTATAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGAAACAAAGGTCATGGAGCAAGCCACAGATGCAGAAAAAGCCATGACTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATGTATTGATTGAGAGACACATGACAACAAAACCAGACATGAAATCTTAA 5718 0.4251 MEGENIRSGTKKKRSKKEIGFDSDDDEPIGSMFKLKRSKKKGSGGGSSDAAVVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVTRGGAIPALHVSDEDLVALGPKGKDEKGVAPVPLVWGDEDMQMQDCTDQQHMEDLLPVIFNKAQSSSSRKSRSQGSRQKKGIQNVDSEGFVEAVDSGVESRSGSASGSKLVGGNVESVELLPQASERVVASVVDDQKCGDDCFQEEAVKGHCDLDIPDGPSQSNNVCHGDMQQLSCVQVEDISCHSDQKVGLQESALSDALKNLSTTSHDEIVDTISLSKVGEGERGFTEAGESENRLTVEPAKVCNSASEPDVSTFAGKENVLTSCHTEPLIKSAETILNENNNMVARKVFQESSWNGALDLSGCHMEVDGGGKSETEFVSDRNFCDYSSLDTKAEVQDFVSGFSPKRNNVTVSGSLSSMVSNEANEAELTAHSNHPEKPLEGCNIPKDSTASILKCSSVLDPIQSDGSSLQSSIPDENGNSAEYRAPVSDFADNEGKISSIPRAVRKTKMRKHGDMTYEGDADWEILIDDQALNESQVMTDGDRTLRSRLKHDSSLNTGEDSENVAVVAVSAGLKARKAGPIEKIKFKEVLKRKGGLKEYLDCRNQILSLWNRDVTRILPLAECGVSDTHSEDGSPRSSLIREVYAFLDQYGYINVGIASQKENVGSNARHCYKLVKEKGFEESLAASMADSEDGVSFLVGQTKMSDTSNEINNGLTKDGDDLTLEAAEGMRHANEMKTDLSNMTQQVERKKNDYQGNDSSVPSSNFPDCRLISLVAKEKSNDSTCIKSALDARVGYHLQSDLDPRKRVIVIGAGPAGLTAARHLERQGFSVFVLEARSRIGGRVFTDHLSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMARSESSEETEQNNSADSPFDSKKDSTLEKKLGEEILSPQERRVMDWHFAHLEYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLTVHLNHVVTNVSYGIKEPGQSNKVKVSTENGNEFFGDAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVVLEFPSVFWDDAVDYFGATAEERSSRGHCFMFWNVRRTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPFSYGSYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRMIDILSSGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDALELSNIMYKNSLDGAHILTREALLREMFFNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKGKASNGGLKISRQTSAVDLSKRKSVKDSALGKPPLGTYHGTIENKGGLLNPTSAGSNSPSTAHVKKLHSKQGRQPAAYDSRHEVSSSRSKGSIDTVVAEKEDNLCTISEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQPSQNDECDSRKRWPGGVYGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSIYTKAWIDTAGGIAIKDHHAIERWQSQAAAADSYFSNPSIDLKDEEDSNACSKLPSWKRDGIANESSISQVTVNKEAQKGHSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSETKVMEQATDAEKAMTVREFLDFKRKNKIRSFVDVLIERHMTTKPDMKS 1905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02442 1905 MobiDBLite consensus disorder prediction 453 473 - -
Gma17g02442 1905 SUPERFAMILY FAD-linked reductases, C-terminal domain 1153 1264 - -
Gma17g02442 1905 Coils Coil 1331 1358 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 51 81 - -
Gma17g02442 1905 PANTHER FLAVIN MONOAMINE OXIDASE 519 1901 - -
Gma17g02442 1905 Gene3D - 592 697 IPR036388 -
Gma17g02442 1905 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1413 1496 IPR035441 -
Gma17g02442 1905 Gene3D - 837 1313 IPR036188 -
Gma17g02442 1905 SUPERFAMILY FAD/NAD(P)-binding domain 833 1317 IPR036188 -
Gma17g02442 1905 Gene3D - 943 1270 - -
Gma17g02442 1905 ProSiteProfiles SWIRM domain profile. 593 693 IPR007526 GO:0005515
Gma17g02442 1905 MobiDBLite consensus disorder prediction 1 92 - -
Gma17g02442 1905 Pfam SWIRM domain 606 683 IPR007526 GO:0005515
Gma17g02442 1905 MobiDBLite consensus disorder prediction 1511 1581 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 1536 1555 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 149 174 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 149 169 - -
Gma17g02442 1905 SUPERFAMILY Homeodomain-like 591 688 IPR009057 -
Gma17g02442 1905 Pfam Flavin containing amine oxidoreductase 845 1315 IPR002937 GO:0016491
Gma17g02442 1905 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 519 1901 - -
Gma17g02442 1905 Coils Coil 762 782 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 1 34 - -
Gma17g02442 1905 MobiDBLite consensus disorder prediction 986 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02442 Gma-Chr17 42386855 42399370 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Gma17g02442 Amino_oxidase 7e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02442 17 42386855 42399370 Gma17g02442 17 42386855 42399370 ECH
Gma17g02442 17 42386855 42399370 Gma14g02114 14 52258396 52269960 GST