Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02440 ATGGCAGAAGACATCGGCAAAAGCAACCTCGAATCCTCTGCTGCTGCTTCAACAACCTCCCGAGGTTTCTGGCCTTCCGTCTTACGTTGGATCCCCACTTCCTCCGATCACATCATCAATGCTGAAAAACGCCTTCTTTCTCTTGTCAAGACTCCATATGTTCAAGAACAGGTCAATATAGGTTCCGGTCCACCTGATTCCAAAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACAGTTACGTTTCACAGTAAGGATGATTCTCCTACGCTGGTGATGGTTCATGGATATGCAGCTTCTCAGGGTTTCTTTTTTCGCAATTTTGATGCCCTTGCCTCCCGTTTCAGAGTGATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTACATGCAGAAGCACTGAAGAAACTGAGGCGTGGTTCGTTGATTCTTTTGAGGAATGGAGAAAGGCCAAAAACCTGAGCAATTTTATACTACTTGGGCATTCTTTTGGTGGTTATGTTGCTTCCAAGTATGCACTTAAGCACCCTGAGCATGTAAAGCACTTGATTCTGGTGGGACCTGCTGGATTTTCATCAGAATCAGAAAGAATTACAAAGTTGTTATCAACATGGAAAGGATCAATCCTGAACCAAATATGGGAATCTAATTTTACACCTCAGAGAATCATCAGAGGTTTAGGTCCTTGGGGTCCTGGTATGGTTCGCAAGTATACAAGTGCCAGGTTTGTTACATATACAACTGGGGAAATGCTGGCAGAATCTGAATCGAGTTTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCCAGTGGCGAGCTGTGCTTAAAATATATATTTTCATTTGGAGCACTCCCGAGGTCACCTCTACTTCACAGTGCATCAGAGTGGAAGGTGCCCACCACCTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGTGCGCAAGAAGCTCGCAAACAAATGAATGTTCCATGTGAAATCCTTAGGGTTCCCCAGGCCGGGCACTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCAGTGTTTTATGCCTGTAGAAGGTTTCTTAGGCCTGATCAAGACACTGAATCCCTTCCTGAAGGGCTAACCTCTGCATAG 1161 0.4453 MAEDIGKSNLESSAAASTTSRGFWPSVLRWIPTSSDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSKVRWFRSSSNEPRFINTVTFHSKDDSPTLVMVHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCRSTEETEAWFVDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSSESERITKLLSTWKGSILNQIWESNFTPQRIIRGLGPWGPGMVRKYTSARFVTYTTGEMLAESESSLLTDYVYHTLAAKASGELCLKYIFSFGALPRSPLLHSASEWKVPTTFIYGFQDWMNYEGAQEARKQMNVPCEILRVPQAGHFVFIDNPSGFHSAVFYACRRFLRPDQDTESLPEGLTSA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02440 386 PANTHER BNAA01G13630D PROTEIN 12 374 - -
Gma17g02440 386 PRINTS Epoxide hydrolase signature 119 134 IPR000639 GO:0003824
Gma17g02440 386 PRINTS Epoxide hydrolase signature 168 181 IPR000639 GO:0003824
Gma17g02440 386 PRINTS Epoxide hydrolase signature 182 195 IPR000639 GO:0003824
Gma17g02440 386 PRINTS Epoxide hydrolase signature 310 326 IPR000639 GO:0003824
Gma17g02440 386 PRINTS Epoxide hydrolase signature 343 365 IPR000639 GO:0003824
Gma17g02440 386 Gene3D alpha/beta hydrolase 50 365 IPR029058 -
Gma17g02440 386 PRINTS Alpha/beta hydrolase fold signature 119 134 IPR000073 -
Gma17g02440 386 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Gma17g02440 386 PRINTS Alpha/beta hydrolase fold signature 182 195 IPR000073 -
Gma17g02440 386 PANTHER RE40534P-RELATED 12 374 - -
Gma17g02440 386 Pfam alpha/beta hydrolase fold 94 215 IPR000073 -
Gma17g02440 386 SUPERFAMILY alpha/beta-Hydrolases 84 362 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02440 Gma-Chr17 42376885 42379741 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02440 17 42376885 42379741 Gma17g02440 17 42376885 42379741 ECH
Gma17g02440 17 42376885 42379741 Gma14g02113 14 52251153 52254924 GST
Gma17g02440 17 42376885 42379741 Gma04g00253 04 2182902 2188566 PCT
Gma17g02440 17 42376885 42379741 Gma06g00232 06 2078874 2082076 PCT
Gma04g00253 04 2182902 2188566 Gma17g02440 17 42376885 42379741 PCT
Gma06g00232 06 2078874 2082076 Gma17g02440 17 42376885 42379741 PCT