Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02437 ATGGATGGCTCATTTATCATAGTAGTGCTTCCTCCTTTACCATTTGACCATATTTATCCATCTCAATCACTTCCCACTTTTTATGAGCATTGGCCAACCCCCACGCTTCCTTTATTCTCCCTCTCAAGCTTCAAGCTACTCACACCAATGAAGATCCAGTGCGACGTTTGCAACAAACACGAGGCCTCCGTCTTCTGCACCGCCGATGAAGCCGCCCTCTGCGACGGCTGCGACCACCGTGTCCACCATGCCAACAAACTCGCCTCCAAACACCAACGCTTCTCTCTTCTCCGCCCTTCTCCTAAACAACACCCTCTCTGCGATATTTGCCAGGAGAGAAGAGCCTTTACATTCTGTCAGCAAGACAGAGCGATTCTCTGCAAAGAGTGTGACGTGTCAATTCACTCTGCCAACGAACACACCCTTAAGCACGATAGGTTCCTTCTCACCGGTGTTAAACTTTCTGCTTCTGCTATGCTTCGTTCGTCAGAAACTACCTCTGATTCAAACTCAAACCCTTCTCTTCTTAACTTTTCACACCAAACAACATTACTACCTCCATCTTCCACCACCACCACCACCACCAGCAACAACAACAACAACAAGGTTGCTGTTGAAGGAACTGGTTCAACTAGTGCTAGCAGCATATCGGAGTATTTGATAGAGACTCTTCCTGGGTGGCAAGTTGAAGACTTTCTTGATTCATATTCTGTTCCCTTTGGTTTCTGTAAGAATGATGAAGTGTTGCCACGGTTTGATGGTGAAATGGAGGGGCATCTGAGTTCTTTCTCAACCGAGAACATGGGGATCTGGGTTCCTCAAGCGCCACCAACTCTTATGTGTTCTTCACAAATGGATCGGGTGATAGTTCACGGTGAGACCAATATCAAAGGTAGCAGCAGATCAAGGTTGAAGGATGATAATTTCACTGTTCCACAGATTAGTCCTCCTTCCAATTCCAAGAGAGCCAGATTTCTGTGGTAG 984 0.4675 MDGSFIIVVLPPLPFDHIYPSQSLPTFYEHWPTPTLPLFSLSSFKLLTPMKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSPKQHPLCDICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLSASAMLRSSETTSDSNSNPSLLNFSHQTTLLPPSSTTTTTTSNNNNNKVAVEGTGSTSASSISEYLIETLPGWQVEDFLDSYSVPFGFCKNDEVLPRFDGEMEGHLSSFSTENMGIWVPQAPPTLMCSSQMDRVIVHGETNIKGSSRSRLKDDNFTVPQISPPSNSKRARFLW 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02437 327 MobiDBLite consensus disorder prediction 299 321 - -
Gma17g02437 327 MobiDBLite consensus disorder prediction 163 209 - -
Gma17g02437 327 ProSiteProfiles Zinc finger B-box type profile. 49 96 IPR000315 GO:0008270
Gma17g02437 327 MobiDBLite consensus disorder prediction 305 320 - -
Gma17g02437 327 SMART bboxneu5 102 149 IPR000315 GO:0008270
Gma17g02437 327 SMART bboxneu5 49 96 IPR000315 GO:0008270
Gma17g02437 327 Gene3D Classic Zinc Finger 50 144 - -
Gma17g02437 327 CDD Bbox1_BBX-like 106 149 - -
Gma17g02437 327 CDD Bbox1_BBX-like 54 96 - -
Gma17g02437 327 PANTHER B-BOX ZINC FINGER PROTEIN 22 50 324 - -
Gma17g02437 327 Pfam B-box zinc finger 103 142 IPR000315 GO:0008270
Gma17g02437 327 ProSiteProfiles Zinc finger B-box type profile. 102 149 IPR000315 GO:0008270
Gma17g02437 327 PANTHER B-BOX ZINC FINGER PROTEIN 19 50 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02437 Gma-Chr17 42361363 42363212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma17g02437 zf-B_box 2.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02437 17 42361363 42363212 Gma11g01013 11 8607770 8609771 ECH
Gma17g02437 17 42361363 42363212 Gma12g00330 12 2741777 2745309 ECH
Gma17g02437 17 42361363 42363212 Gma17g02437 17 42361363 42363212 ECH
Gma17g02437 17 42361363 42363212 Gma14g02110 14 52235560 52237258 GST
Gma17g02437 17 42361363 42363212 Gma04g00085 04 751498 753238 PCT
Gma17g02437 17 42361363 42363212 Gma06g00080 06 721842 723021 PCT
Gma04g00085 04 751498 753238 Gma17g02437 17 42361363 42363212 PCT
Gma06g00080 06 721842 723021 Gma17g02437 17 42361363 42363212 PCT