Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02430 ATGGGGTTTCTCGAAAGAATCAGTTACTCACACTCCGTTGGTTCCTCTTGTACCGAAATTCGGATAATGGTGTCTCTAATTTCAACATCTCCACCTTCTTCATCTTTCAACATTCATCCCTTCTTCTCTCCAAGGGGCGTCCAATTCAGACACAACTGCGTAAATTACAAACGGAAAACGGTACGGTGCGCCGTCACCAGCGCCGACGCATCTCCTCCGCCGTCAACGTCGTTGGCCAAGGAACCTCACAAATACTTCGACCACGTCATcatcaccgttcgcgccggtgacggcggccacggcgcggtgctgaatcagcagcagcagcagcagcagcagcagcagcaaggAAAAACGAAGTTGAAGAAAGGGAAAGGCTCGTTGAAGAGGGACTTCGACGGATCCCTCATTCTCCCCATGGGTGGCCACGGAGGTGACGTCGTGCTCTACGCCGACGAGTCCAAAGACACGCTGCTGGAGTTTCACAACAAAGGCCGCTACCACGCCAAACGCGGTGGCAACGTTGATGCCATGGGCGTTTTGACTTCGATGCTTCGCGATGGACTTGCTGCACCGACGCTGCGTATTGCTGTTCCTGTAGGTTTGTATGCTCTGGTTTTGTGttttaatctatttcgtcaatataaaggaggtttaattataaaattgATTAGCTTGTTAGAAATGCCACAGCATAAAAGGAAAAAGATGATGGCTCTGACAACTAATGTGATGAGAGATGACTCGGACAAGGTTTTAATTCACGGTCAACCTGGGGAGGAAGTTAAGCTGGAGTTGATCCTACGAGTTGTTGCTGACGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCCGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCTGAAGCCACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGTAATTTTTTGAGGCACCTCAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCTGCCACTGAGAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGATCGACCATACGTTGTAATTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAAACTTCCATCATTGACTCAAGAAATTATGAGAATTGGCAACGATGGTGCTGCTTCCGATCCAAAACCTAGCCCTGAAGTTCTAGATCCATTGTCTGATGAAACTGACAGGAAGGAAAAAAGACTTGAGGACTATCCACGACCTCTCTCTGTTGTTGGAGTTAGCGTTCTAAAGGGTATCAGGATTAACGAGATGTTAAAGGAGATAAGGTCGGCTTTAAGGAAGTGCTCAGATTCCAAAGAAGCATTGTCTTTCAGCGTGCCACCTTGA 1494 0.429 MGFLERISYSHSVGSSCTEIRIMVSLISTSPPSSSFNIHPFFSPRGVQFRHNCVNYKRKTVRCAVTSADASPPPSTSLAKEPHKYFDHVIITVRAGDGGHGAVLNQQQQQQQQQQQGKTKLKKGKGSLKRDFDGSLILPMGGHGGDVVLYADESKDTLLEFHNKGRYHAKRGGNVDAMGVLTSMLRDGLAAPTLRIAVPVGLYALVLCFNLFRQYKGGLIIKLISLLEMPQHKRKKMMALTTNVMRDDSDKVLIHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLDRPYVVILNKIDLPEAKDKLPSLTQEIMRIGNDGAASDPKPSPEVLDPLSDETDRKEKRLEDYPRPLSVVGVSVLKGIRINEMLKEIRSALRKCSDSKEALSFSVPP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02430 497 MobiDBLite consensus disorder prediction 103 128 - -
Gma17g02430 497 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 58 490 IPR045086 GO:0003924|GO:0005525
Gma17g02430 497 MobiDBLite consensus disorder prediction 103 121 - -
Gma17g02430 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 482 IPR027417 -
Gma17g02430 497 MobiDBLite consensus disorder prediction 435 450 - -
Gma17g02430 497 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma17g02430 497 SUPERFAMILY Obg GTP-binding protein N-terminal domain 85 205 IPR036726 -
Gma17g02430 497 MobiDBLite consensus disorder prediction 421 450 - -
Gma17g02430 497 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 58 490 - -
Gma17g02430 497 Gene3D GTP1/OBG domain 84 270 IPR036726 -
Gma17g02430 497 CDD Obg 272 410 IPR031167 GO:0005525
Gma17g02430 497 ProSiteProfiles Obg domain profile. 83 271 IPR006169 -
Gma17g02430 497 Pfam GTP1/OBG 87 201 IPR006169 -
Gma17g02430 497 Gene3D - 271 490 IPR027417 -
Gma17g02430 497 Pfam 50S ribosome-binding GTPase 273 400 IPR006073 GO:0005525
Gma17g02430 497 ProSitePatterns GTP1/OBG family signature. 332 345 IPR006074 GO:0005525
Gma17g02430 497 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 272 482 IPR031167 GO:0005525
Gma17g02430 497 PRINTS GTP1/OBG GTP-binding protein family signature 295 313 IPR006073 GO:0005525
Gma17g02430 497 PRINTS GTP1/OBG GTP-binding protein family signature 274 294 IPR006073 GO:0005525
Gma17g02430 497 PRINTS GTP1/OBG GTP-binding protein family signature 347 365 IPR006073 GO:0005525
Gma17g02430 497 PRINTS GTP1/OBG GTP-binding protein family signature 330 345 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02430 Gma-Chr17 42272500 42277784 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02430 17 42272500 42277784 Gma17g02430 17 42272500 42277784 ECH
Gma17g02430 17 42272500 42277784 Gma14g00603 14 5883084 5887551 GST