Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02428 ATGGACGTTGATCCTTGCCAATACGAACAAATTGCTATAAATGAAAAAGATGTCAACAACATCATTCTGTCATACCTTATACATAATTGCTACAAAGAGTCATCAGAGTCATTCATTTCTTGCACTGGGATGAAGCAGCCTGCAGATCATTTGGAGAACATGGAAAAAAGAAAAAGAATCTTTCACCATGCATTGGAGGGAAATGTACTTAAGGCGATTGAGCTCACAGGGCAGCTGGCACAGGATATTCTGGAGAACAATAATGATTTGCTGTTTGATCTTCTAAGCCTTCATTTTGTAGACCTTGTCTGCTCTAAGGAATGGGCAGAAGCTTTGGAGTTTGCTCAGACCAAGTTGAGTCCTTTTAGTGTGAAGGAGCAGAAATATATGGAAAAAATAGAAGGTTTTATGTCCCTTCTTGCTTATGAGAATCCAGTGGAATGCCCAATGTTTCATCTGATTGGCTTAGACTATCGGCAACAAGTTGTGGATAGTTTGAATCAAACTATTCTCGCACACTTTAACCTTCCCATCCACACTGCCATGGAGCGGCTTATACAACAGACCTCAGTAGTTAGACAATGCTTAAGCCTGGAGGATGGGGGGCCTCCACCATTTTCCTTGAAGGATATTCTTAAAAGTCAATGA 648 0.4074 MDVDPCQYEQIAINEKDVNNIILSYLIHNCYKESSESFISCTGMKQPADHLENMEKRKRIFHHALEGNVLKAIELTGQLAQDILENNNDLLFDLLSLHFVDLVCSKEWAEALEFAQTKLSPFSVKEQKYMEKIEGFMSLLAYENPVECPMFHLIGLDYRQQVVDSLNQTILAHFNLPIHTAMERLIQQTSVVRQCLSLEDGGPPPFSLKDILKSQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02428 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 193 IPR024964 -
Gma17g02428 215 SMART toby_final6 106 202 IPR013144 -
Gma17g02428 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Gma17g02428 215 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 12 213 - -
Gma17g02428 215 SMART ctlh 53 110 IPR006595 -
Gma17g02428 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Gma17g02428 215 PANTHER RAN BINDING PROTEIN 9-RELATED 12 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02428 Gma-Chr17 42259303 42262100 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02428 17 42259303 42262100 Gma17g02428 17 42259303 42262100 ECH
Gma17g02428 17 42259303 42262100 Gma04g00267 04 2339580 2342245 PCT
Gma17g02428 17 42259303 42262100 Gma06g00252 06 2246616 2249803 PCT
Gma04g00267 04 2339580 2342245 Gma17g02428 17 42259303 42262100 PCT
Gma06g00252 06 2246616 2249803 Gma17g02428 17 42259303 42262100 PCT