Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02426 ATGGAAACCAACTCAGTTTCCAAGCTTCTGTTACTTGTCTTCACTGTTCTGTTTGTTGGTTCTGAGTTGATCCATTGCAGTGTCACCTATGATAGGAAGGCCATTATCATCAATGGCCAAAGGAGAATCCTCATCTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAAATGTGGGAGGATCTAATTGGGAAGGCGAAAGACGGAGGCCTTGATGTCATTGACACTTATGTTTTCTGGAATGTTCATGAGCCATCTCCTGGCAATTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATCAAGACAGTGCAAAGGGTGGGGCTCTATGTCCATCTTCGCATTGGACCTTATGTGTGTGCTGAGTGGAACTTTGGAGGATTTCCAGTTTGGTTGAACTATGTTCCTGGCATCAGCTTCAGAACAGATAATGGCCCTTTTAAGGCCGCAATGCAAGGTTTCACTCAGAAAATAGTCCAGATGATGAAGAATGAAAAGCTATTTCAGTCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAATGAGTATGGACCAGAAAGCAGGCAATTGGGAGCTGATGGTCATGCATACACAAATTGGGCGGCAAAGATGGCTGTTGGATTGGGCACAGGTGTCCCCTGGGTGATGTGCAAGCAAGATGATGCCCCAGATCCAGTGATAAATACATGTAATGGATTTTATTGTGATTATTTCTCTCCAAATAAACCATACAAGCCTAACCTTTGGACTGAGTCTTGGAGTGGCTGGTTTACAGAATTTGGTGGTCCAATTTACCAGCGACCCGTTCAGGATCTAGCATTTGCAGTTGCTCGTTTCGTTCAAAAGGGTGGCTCACTTTTCAATTACTACATGTACCATGGAGGAACAAATTTTGGACGATCAGCTGGAGGGCCATTCATTACTACAAGCTATGACTATGACGCTCCAATTGATGAATATGGTTTGATCAGGGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATTAAGCAATGTGAACATGCTTTGGTTTCTTCAGATCCCACTGTGACATCATTAGGAACGTATGAGCAGGCTCATGTGTTCTCTTCGAAAAATGGAGCATGTGCAGCTTTTCTAGCAAACTACCATTCGAATTCGGCAGCAAGAGTGAAGTTCAATAACAGGAACTATGACTTGCCTCCTTGGTCCATAAGTATCCTCCCTGATTGTAGAACAGATGTATTTAACACTGCAAGAGTGAGGTTTCAAACTTCACAGATACAAATGTTACCTAGCAATTCTAGGTTGTTATCATGGGAGACCTATGATGAAGATGTATCTTCGCTAGCCGAAAGTTCCAAGATTACAGCTTCTGGACTATTAGAACAGATCAGCACTACCAGAGACACTAGTGACTATCTATGGTATATAACCAGtgttgacataagttcatcagaatcctttcttagaggaaggaacaagcccagcattactgtgcattctgccggccatgctgtccatgtatttattaatggtcaattttcaggctccgcttttgggacaagtaaagacagaagttgcacatttaatggccctgccaacctacgtgctggaactaataaaatagcacttcttagtgtagctgttggattaccaaatgttggattccattttgaaacatggaaggctgggatcactggagttttgcttaatggacttgatcatggacaaaaagatttgacttggcagaagtggtcataccagATTGGTCTAAGAGGAGAGGCTATGAATTTGGTGGCTCCCAATGGGGTCTCATCTGTTGACTGGGAGAAAGACTCACTAGCTGTCCGAAGCCAGTCACAGTTGAAATGGCACAAGGCATATTTCAATGCACCTGAGGGAGTTGAACCATTGGCCTTGGACCTGAGCAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGGAGATACTGGATGGTTTATGCAAAGGGTTCTTGTAGTTCTTGCAACTATGCTGGTACATACCGGCCTGCCAAGTGCCAACTTGGTTGTGGACAACCTACTCAACGATGGTATCATGTGCCAAGATCATGGTTAAGGCCAACAAAGAACTTGATAGTAGTATTTGAGGAATTGGGTGGGAATCCTTGGAAAATAGCTCTAGTAAAAAGGACAACACATACTCCAGCAAACTAG 2199 0.3724 METNSVSKLLLLVFTVLFVGSELIHCSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIGKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQRVGLYVHLRIGPYVCAEWNFGGFPVWLNYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESRQLGADGHAYTNWAAKMAVGLGTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKPYKPNLWTESWSGWFTEFGGPIYQRPVQDLAFAVARFVQKGGSLFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGTYEQAHVFSSKNGACAAFLANYHSNSAARVKFNNRNYDLPPWSISILPDCRTDVFNTARVRFQTSQIQMLPSNSRLLSWETYDEDVSSLAESSKITASGLLEQISTTRDTSDYLWYITSVDISSSESFLRGRNKPSITVHSAGHAVHVFINGQFSGSAFGTSKDRSCTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKAGITGVLLNGLDHGQKDLTWQKWSYQIGLRGEAMNLVAPNGVSSVDWEKDSLAVRSQSQLKWHKAYFNAPEGVEPLALDLSSMGKGQVWINGQSIGRYWMVYAKGSCSSCNYAGTYRPAKCQLGCGQPTQRWYHVPRSWLRPTKNLIVVFEELGGNPWKIALVKRTTHTPAN 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02426 732 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Gma17g02426 732 PANTHER BETA-GALACTOSIDASE RELATED 3 731 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Gma17g02426 732 SUPERFAMILY Galactose-binding domain-like 581 722 IPR008979 -
Gma17g02426 732 Gene3D - 597 730 - -
Gma17g02426 732 PANTHER BETA-GALACTOSIDASE 3 731 - -
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Gma17g02426 732 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Gma17g02426 732 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Gma17g02426 732 Gene3D Glycosidases 24 344 - -
Gma17g02426 732 SUPERFAMILY Galactose-binding domain-like 402 564 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02426 Gma-Chr17 42242658 42248436 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02426 17 42242658 42248436 Gma17g02426 17 42242658 42248436 ECH
Gma17g02426 17 42242658 42248436 Gma14g00608 14 5918753 5923276 GST
Gma17g02426 17 42242658 42248436 Gma04g00271 04 2354062 2359334 PCT
Gma17g02426 17 42242658 42248436 Gma06g00255 06 2261491 2265990 PCT
Gma04g00271 04 2354062 2359334 Gma17g02426 17 42242658 42248436 PCT
Gma06g00255 06 2261491 2265990 Gma17g02426 17 42242658 42248436 PCT