Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02424 ATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGTTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGGTTGACAAAGTTGGTGATCCCCAGAAACTCAGGCTAGAAGCTGAAAAAAGAGATGATGTTGTATGCATATCTGCTTTAAGTGGTAATGGCTTGCAAGAATTTTGTAATGCAGTTCAAGACAAGCTAAAGGACTCCATGGTTTGGGTGGAAGCTCTGGTCCCATTTGAAAATGGGGACCTTCTCAGCACCATACACCAGGTTGGAATGGTTGAGAAAACTGAATATACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGAATGCTTACACCCATGAGGCAACTGTGCGTATCGCAACCTTAA 1590 0.4459 MSGTGTFFYGSVIQPLIRYHYLSPPIPIRPLCCISPLITSIHSNDAVSPQNGTLRFQTEHQQHSEEPLPVPSLSAAEENKATTKLRKKKEDDVVSDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELSQLVDTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPKLIVWNKVDKVGDPQKLRLEAEKRDDVVCISALSGNGLQEFCNAVQDKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARMLTPMRQLCVSQP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02424 529 Pfam 50S ribosome-binding GTPase 306 424 IPR006073 GO:0005525
Gma17g02424 529 Hamap GTPase HflX [hflX]. 132 495 IPR016496 GO:0005525
Gma17g02424 529 Gene3D - 303 471 IPR027417 -
Gma17g02424 529 TIGRFAM small_GTP: small GTP-binding protein domain 305 459 IPR005225 GO:0005525
Gma17g02424 529 MobiDBLite consensus disorder prediction 57 89 - -
Gma17g02424 529 Pfam GTP-binding GTPase N-terminal 129 218 IPR025121 -
Gma17g02424 529 TIGRFAM GTP_HflX: GTP-binding protein HflX 111 465 IPR016496 GO:0005525
Gma17g02424 529 Pfam GTP-binding GTPase Middle Region 221 298 IPR032305 -
Gma17g02424 529 Gene3D - 121 221 IPR042108 -
Gma17g02424 529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 476 IPR027417 -
Gma17g02424 529 PANTHER GTP-BINDING PROTEIN HFLX 83 514 IPR016496 GO:0005525
Gma17g02424 529 CDD HflX 263 466 IPR030394 GO:0005525
Gma17g02424 529 PRINTS GTP1/OBG GTP-binding protein family signature 306 326 IPR006073 GO:0005525
Gma17g02424 529 PRINTS GTP1/OBG GTP-binding protein family signature 373 391 IPR006073 GO:0005525
Gma17g02424 529 Coils Coil 277 297 - -
Gma17g02424 529 PANTHER GTP-BINDING PROTEIN 6-RELATED 83 514 - -
Gma17g02424 529 Gene3D - 222 289 - -
Gma17g02424 529 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 304 470 IPR030394 GO:0005525
Gma17g02424 529 Pfam HflX C-terminal domain 436 504 IPR045498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02424 Gma-Chr17 42206782 42213881 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02424 17 42206782 42213881 Gma17g02424 17 42206782 42213881 ECH