Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02408 ATGTTCAGAAACCAGTACGACACGGACGTGACCACATGGAGCCCTGCGGGGAGGCTGTTCCAGGTGGAGTACGCTATGGAGGCGGTGAAGCAGGGCTCGGCGGCGATAGGGCTCCGATCGAAGACCCACGTGGTCCTCGCATGCGTCAACAAGGCCAACTCCGAACTCTCCTCGCACCAGAAGAAGATCTTCAAGGTCGACAATCACATCGGCGTCGCCATCGCTGGCCTCACCGCCGATGGCCGCGTCCTCTCCCGCTACATGAGATCCGAATGCATCAACTATAATTACACCTACGAGTCGCCGCTCCCCGTCGGCAGACTAGTCGTTCAGCTCGCCGATAAGGCTCAGGTTTGCACACAGCGGTCTTGGAAACGTCCTTATGGGGTTGGACTCCTGGTAGCTGGATTAGATGAATCAGGAGCTCACCTCTATTACAACTGTCCCAGTGGAAACTATTTTGAATATCAGGCTTTTGCTATTGGGTCTCGCTCTCAAGCTGCTAAGACATATTTGGAACGCAGGTTTGAGAATTTCGTGGGTTCTTCGAGAGAAGATCTGATCAAAGATGCACTTATTGCAACTAGGGAGTCCTTGCAAGGTGAAAAACTCAGGAGTTCTGTGTGCACAATTGCTGTGGTTGGAGTTGGTGAGCCTTTCCACATTTTGGATCCAGAAACTGTTCAACAGttgattgatacttttgagattgtgagggaggaagaagccgctccagccgaagaagaagctcagccagCAGCCGAACAGGATGCTCCCACAgatcagggtgctgctgctgctgatcaaggtgctgctgctgctgTAGACCAAGGTGGTTCTCCTATGGACATCTAA 855 0.4561 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDNHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFVGSSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDPETVQQLIDTFEIVREEEAAPAEEEAQPAAEQDAPTDQGAAAADQGAAAAVDQGGSPMDI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02408 284 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Gma17g02408 284 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Gma17g02408 284 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 267 - -
Gma17g02408 284 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Gma17g02408 284 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 234 IPR029055 -
Gma17g02408 284 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Gma17g02408 284 MobiDBLite consensus disorder prediction 242 284 - -
Gma17g02408 284 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Gma17g02408 284 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Gma17g02408 284 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 267 - -
Gma17g02408 284 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02408 Gma-Chr17 42074651 42076476 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02408 17 42074651 42076476 Gma17g02408 17 42074651 42076476 ECH
Gma17g02408 17 42074651 42076476 Gma14g00628 14 6125694 6128672 GST