Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02378 ATGCCATCTAATTACTTTTCAAGGCTCGCAGCTTCGATTCAGAGATCGATTGCGGGGAAAGAAGGCCGAATCCGGGACTCTGCCGAAGTTCTCATTGGGCAAGGGAAGTTGTGGTTTGGTAGTTCTAAGTTTTTTCATTCTGTGCATAGCTCATATTGTGTGGAAGTGCAGCTTCTAGTTTGGCCCGACGTAGCCTTAGCTTCGAGCTCTGAATTAGGTGGCAAAAGGAGAACATTGTCTGTAGTTGACACGCTGTCTCGGACATTTTCGGTTCCGTCGGTGTCAGGGCCTTCGTTTCAGGTCTGTGGATACCACATTGGTTCTACCCTTGCTGGACCTGATCAGTTTTCTAGTGGGACGAGATTTCAGATTAAGACAATGGCTGCCCACTTGCCCAGAATATTGGTTGGTGAATCCTATTTAGATAACCTTACTTTGAAGGGTAGTCGCCGTTCGCTGTCAACCAAGAATAGCAGCAGTATATGTTTGAGCACGAGTTTGAGGAATCGTGGAAAAGTGAGCATGAGATTGAAAAACCATCAGCAGCCAGATAACACTGCAATTTATGGATATTTAATTTATAATGCTGCCAAGACCTGGTGTAATTCTCATCCTTACATGCAGTCAGGGTCTGGAGATTTTCATACTTTGTCATCTTCGTGTTACTCTGTTGGGCCTGCTCATGATGTGCCTTTTGACACTGCTGCCCGCGAGGAACAGTTAAGCAGTTCTGCAGATTCATCTGAACAGAAAACTCCTTTAGGTAAGACCCTTAAGTTAATATCAGGATCATGCTACTTGCCTCATCCCGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAAGAACAAGCAATAGGGGTGGCAGATGGTGTTGGTGGCTGGGCAGATCTTGGTGTTAATGCTGGATATTACTCTCGTGAGCTCATGTCCAAATCAGTGGAAGCTATTCAGGATGAGCCCAAAGGTTCAATTGATCCAGCTAGGGTGCTGGAAAAAGCACACTCAAGTACAAAAGCTAGGGGTTCCTCTACAGCGTGCATCATTGCACTTACTGATCAGGGCCTTAATGCTATCAATTTGGGAGACAGTGGGTTTATGGTGGTCCGGGATGGGTGCACCATATTCCGGTCCCCAGTGCAGCAACATGATTTCAATTTCACTTATCAGCTGGAATGTGGTAGTAATGGTGATTTACCTAGTTCTGGTCAGGTTTTTACCATTCCCGTTGCACCCGGTGATGTCATAGTTGCTGGTACAGATGGGCTATTTGATAACTTGTACAATAATGAGATTACAGCAGTGGTGGTTCATGCCATGAGAACCGGATTAAGCCCTCAGGTGACAGCCCAGAAGATAGCTGCATTGGCACGTCAACGGGCACTGGATAAAGACAGGCAGACTCCTTTTTCAACCGCTGCTCAAGATGCTGGTTTTCGTTACTATGGTGGCAAACTTGATGATACAACAGTTGTAGTTTCATATATTTCCGGCTCTGATGATGCATAA 1521 0.453 MPSNYFSRLAASIQRSIAGKEGRIRDSAEVLIGQGKLWFGSSKFFHSVHSSYCVEVQLLVWPDVALASSSELGGKRRTLSVVDTLSRTFSVPSVSGPSFQVCGYHIGSTLAGPDQFSSGTRFQIKTMAAHLPRILVGESYLDNLTLKGSRRSLSTKNSSSICLSTSLRNRGKVSMRLKNHQQPDNTAIYGYLIYNAAKTWCNSHPYMQSGSGDFHTLSSSCYSVGPAHDVPFDTAAREEQLSSSADSSEQKTPLGKTLKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMSKSVEAIQDEPKGSIDPARVLEKAHSSTKARGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTIFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRTGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYISGSDDA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02378 506 Gene3D - 403 504 IPR036457 -
Gma17g02378 506 SMART PP2C_SIG_2 273 500 IPR001932 -
Gma17g02378 506 PANTHER PROTEIN PHOSPHATASE 89 505 - -
Gma17g02378 506 Pfam Stage II sporulation protein E (SpoIIE) 289 498 IPR001932 -
Gma17g02378 506 PANTHER PROTEIN PHOSPHATASE 2C 89 505 IPR039123 -
Gma17g02378 506 SUPERFAMILY PP2C-like 265 498 IPR036457 -
Gma17g02378 506 SMART PP2C_4 251 498 IPR001932 -
Gma17g02378 506 Gene3D - 270 396 IPR036457 -
Gma17g02378 506 ProSiteProfiles PPM-type phosphatase domain profile. 261 500 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02378 Gma-Chr17 41848259 41854150 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02378 17 41848259 41854150 Gma17g02378 17 41848259 41854150 ECH
Gma17g02378 17 41848259 41854150 Gma14g00658 14 6448355 6455225 GST